PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015025.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 281aa    MW: 31514.3 Da    PI: 7.5985
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.61.3e-28107167159
                  ---SS-EEEEEEE--TT-S.S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgse.fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ k+++  pr+Y+rC++a +Cpvkkkv+rs ed++++ +tYegeHnh+
  PCP015025.1 107 VKDGYQWRKYGQKVTKDNPsSPRAYFRCSFApRCPVKKKVQRSMEDNSFLMVTYEGEHNHD 167
                  58**************997369********99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDARTPNKQK VVDSVQEDLQ RLRNENATLR FLLQAMTTRC SILEQKHHHH HQMHIQQQPC  60
DHQQMLNSAI TSKRPRTDDH CDQFPASHHK TSQFLVKTDS KDNSLIVKDG YQWRKYGQKV  120
TKDNPSSPRA YFRCSFAPRC PVKKKVQRSM EDNSFLMVTY EGEHNHDTIN DSLLFGQFAC  180
SVAAGADLQN IIMPISVPSS SIEPNNDVIN ISSSPPETVT LDLNLSGSTN QENGALGSPQ  240
SMNCDRRVED FIASLTKDPN FTQALAAAVA RSITGPADRP N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-39WRKY family protein