PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015014.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 297aa    MW: 33300 Da    PI: 5.2465
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015014.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.61.1e-32114170258
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                  dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h
  PCP015014.1 114 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 170
                  8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEESMAATWS DWSEEELVRE LLDNDSPLFV LPEEAVQSRA ASVFGKEAIN RFIPNVYSGP  60
TIQDIEAALS VTTGTVQPQE LPNARLSLLE RGLSKVEHKY TLKIKSCGNG IMADDGYKWR  120
KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFNLNN  180
QAQNSTPPMK KTKKKTSDPQ PEDQEREAQE SPRSVTPDPV PDLPPGPFPD QHQEFVEEER  240
SSQGLLQDMV PFMIRNPKPT SASSNSSCSS YRSSPTSPSS LSWATSYFDV GINHSFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.13e-50WRKY family protein