PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP014970.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 373aa MW: 39978.5 Da PI: 7.1945 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.2e-18 | 46 | 93 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell++++k+ G g+W+t ++ g+ R++k+c++rw +yl PCP014970.1 46 RGPWTPEEDELLANYIKKEGEGRWRTLPKQAGLLRCGKSCRLRWMNYL 93 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.4e-15 | 104 | 144 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l PCP014970.1 104 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 144 89***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MRNPPSSSKA TAAASATMTT ASPSSSKAGI AGGSKTPCCV KVGLKRGPWT PEEDELLANY 60 IKKEGEGRWR TLPKQAGLLR CGKSCRLRWM NYLRPSVKRG QIAPDEEDLI LRLHRLLGNR 120 WSLIAGRIPG RTDNEIKNYW NTHLSKKLIS QGIDPRTHKP LNPDHHSAAA DADVDNTNKS 180 VAAAVSFKAN TRFSNPNPSP PPSDRLVHQG ADPSINGNDG NIALDHDLGT IVHSCANLIT 240 SINNPDASSS AAAMGTLSLR TNNNSHAGVL LGGGGNEEDE DINCCADDVF SSFLNSLINE 300 DPFAVQHQLQ QQVLHNGNVS THAAGAGSDH VPLISMTSAS TMTPSTFGWD SAVLMSSAFI 360 QNDHQRVTDQ TEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-80 | MYB family protein |