PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014767.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 503aa MW: 54729.9 Da PI: 6.312

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014767.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.7e-16	32	79	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++vk++G g+W+ + + g+ R++k+c++rw ++l PCP014767.1 32 KGPWTGAEDAILVEYVKKHGEGNWNVVQKNSGLARCGKSCRLRWANHL 79 79******************************************9986 PP
2	Myb_DNA-binding	46.5	8.5e-15	85	128	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+ ++eE+ l++++++++G++ W++ a+ ++ gRt++++k++w++ PCP014767.1 85 KGSLSPEEERLIIELHAKFGNK-WARMASQLP-GRTDNEIKNYWNT 128 57789***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MIINNSGVMD GVHKTGGGSH HHHHHHQRGL KKGPWTGAED AILVEYVKKH GEGNWNVVQK 60 NSGLARCGKS CRLRWANHLR PNLKKGSLSP EEERLIIELH AKFGNKWARM ASQLPGRTDN 120 EIKNYWNTRM KRRQKAGLPV YPHDLQQEAA AAAFHHQHQL RHSSSSPACS FSSLFSSSHP 180 RKPNSFSPSQ LSLYDHITST FSSTSDHQNP NNNYFLQNHH HNSSSLYSNP MTQFHGNGGF 240 AMPLSPVSPF GSSALFNQSN IPNQTLIGQY NSHGGFGGYN NFSLSSMIMG PTTYDPTPLV 300 QGSNPELPSN QTPLSINGGS EGQMGGSGYT ANEDHYEIAP VPSQGNSGLL DDVLVEAQNI 360 SNKKAKSGDS CSSGWSGQEK GLMVEEEEEE ESAEEEAEDT VQVESTLKNS GENSAENQRG 420 GSSSLSSIGM IQNEDPLEEM DDDLLSLLNF PSTMPAVSES WYAQGCTSNR ASRSGVSTSD 480 NVSLEIAKCT VDAIGQDQHC GSI

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MIINNSGVMD GVHKTGGGSH HHHHHHQRGL KKGPWTGAED AILVEYVKKH GEGNWNVVQK  60
NSGLARCGKS CRLRWANHLR PNLKKGSLSP EEERLIIELH AKFGNKWARM ASQLPGRTDN  120
EIKNYWNTRM KRRQKAGLPV YPHDLQQEAA AAAFHHQHQL RHSSSSPACS FSSLFSSSHP  180
RKPNSFSPSQ LSLYDHITST FSSTSDHQNP NNNYFLQNHH HNSSSLYSNP MTQFHGNGGF  240
AMPLSPVSPF GSSALFNQSN IPNQTLIGQY NSHGGFGGYN NFSLSSMIMG PTTYDPTPLV  300
QGSNPELPSN QTPLSINGGS EGQMGGSGYT ANEDHYEIAP VPSQGNSGLL DDVLVEAQNI  360
SNKKAKSGDS CSSGWSGQEK GLMVEEEEEE ESAEEEAEDT VQVESTLKNS GENSAENQRG  420
GSSSLSSIGM IQNEDPLEEM DDDLLSLLNF PSTMPAVSES WYAQGCTSNR ASRSGVSTSD  480
NVSLEIAKCT VDAIGQDQHC GSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	9e-68	MYB family protein