PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014561.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 306aa    MW: 34519.7 Da    PI: 9.8605
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014561.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.1e-072871344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     rWT+ E + + +a + + ++   +W+++a+ ++ g+t  ++   +
      PCP014561.1 28 RWTPAENKMFENALAVYDKDapdRWHKVAELIP-GKTVRDVMKQY 71
                     9********************************.***99998766 PP
2Myb_DNA-binding48.22.5e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      PCP014561.1 137 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKFEMEILSP SSYFSTSNRL IEESKSARWT PAENKMFENA LAVYDKDAPD RWHKVAELIP  60
GKTVRDVMKQ YEELELDVGK IEAGLIPIPG YGPSPFTLEW VNRHGGYDGF KQQSYGIGGK  120
RSSSNRPSDH ERKKGVPWTE EEHKLFLMGL KKYGKGDWRN ISRNFVVTRT PTQVASHAQK  180
YFIRQLSGGK DKRRASIHDI TVNLNDMRTP SPDNKSPLSP ELPQHPNSAA TARAPFQWHQ  240
PQGGGVNLGF NQGHGNMFMS SHPYGISSYG QKMQGQDLHK GAANNLYYGP QNLGFQMQSS  300
QHYPHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-100MYB_related family protein