PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014534.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 760aa MW: 86947.3 Da PI: 7.0505

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014534.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.5	3e-20	42	125	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 n YA + GFs+rk + ++ ++n+ + +r+f Cskeg++ +e+ e ++ +r trtgCka+++ + + +++w++++l+ +HnHe+a PCP014534.1 42 NIYAFKKGFSIRKGNIRRDSHNN-VRQRDFFCSKEGFQPDEDLC-EVKKVRRLDTRTGCKAMIRFTVD-NDVWKISHLNPDHNHEFA 125 67*************997776.************9998.899999************9.*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MDNDWRGKVL EKNDKEEIFE AIDELKVGME VSNEAEAYNL CNIYAFKKGF SIRKGNIRRD 60 SHNNVRQRDF FCSKEGFQPD EDLCEVKKVR RLDTRTGCKA MIRFTVDNDV WKISHLNPDH 120 NHEFARPEER QFLRSGRHIP GVRAALVSSM VDGSPKPTQS YSLLGKDSGS AENVGSTNKG 180 CHNCLQRKNE EMLEGRDGQS LLNYFRHKQA EDPNFFYSVQ VDQFNRVTNF FWRDSRSKLD 240 YDCFGDAVCF DTTFRTRKYN LICAPFVGVN HHCKNVLFGC AFMSDVSADS ITWLLETFMV 300 SVGNKQPKTI FTDEDIAMGN AMASILPETR HRLCIWHISK NAAQYLGSHS TNPEFKEHFN 360 KCFHDCLTEA EFEATWNDMI IKFNLEGNAW LKKLYSLREK WCPAFSLDTY TANIRSPHRG 420 ESITGTFHQV STKTMDLIGL VHHYEKKTRA LRTAELEEDF RCKNGTPHLR VNSGIFKHAS 480 AEYTVKMYSY FENELMSIFA VRMIEVGNDG NQYIYEAIEE GNQRAYMIDY NSTTAMVLCS 540 CKLFESMGIL CRHSLKVLDL KNFTCLPPQY IMKRWTKGAK TRVAVSGDSF ESSYKTGKSS 600 QSSRLSSLMH EANNVFSVAA LCDSGTRIVR QKLEEAMKLL ESDEQSDILG FAKRESGNMF 660 GTAIRCIARK PKPPMKPIEL NTPPEQTQTI TRAIFDIVKE HASWVERIDE QEAHEDSAEV 720 DEGEAEAQID MQPSRGSEAV SVHHLVYKAQ QLQAEAKARK

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MDNDWRGKVL EKNDKEEIFE AIDELKVGME VSNEAEAYNL CNIYAFKKGF SIRKGNIRRD  60
SHNNVRQRDF FCSKEGFQPD EDLCEVKKVR RLDTRTGCKA MIRFTVDNDV WKISHLNPDH  120
NHEFARPEER QFLRSGRHIP GVRAALVSSM VDGSPKPTQS YSLLGKDSGS AENVGSTNKG  180
CHNCLQRKNE EMLEGRDGQS LLNYFRHKQA EDPNFFYSVQ VDQFNRVTNF FWRDSRSKLD  240
YDCFGDAVCF DTTFRTRKYN LICAPFVGVN HHCKNVLFGC AFMSDVSADS ITWLLETFMV  300
SVGNKQPKTI FTDEDIAMGN AMASILPETR HRLCIWHISK NAAQYLGSHS TNPEFKEHFN  360
KCFHDCLTEA EFEATWNDMI IKFNLEGNAW LKKLYSLREK WCPAFSLDTY TANIRSPHRG  420
ESITGTFHQV STKTMDLIGL VHHYEKKTRA LRTAELEEDF RCKNGTPHLR VNSGIFKHAS  480
AEYTVKMYSY FENELMSIFA VRMIEVGNDG NQYIYEAIEE GNQRAYMIDY NSTTAMVLCS  540
CKLFESMGIL CRHSLKVLDL KNFTCLPPQY IMKRWTKGAK TRVAVSGDSF ESSYKTGKSS  600
QSSRLSSLMH EANNVFSVAA LCDSGTRIVR QKLEEAMKLL ESDEQSDILG FAKRESGNMF  660
GTAIRCIARK PKPPMKPIEL NTPPEQTQTI TRAIFDIVKE HASWVERIDE QEAHEDSAEV  720
DEGEAEAQID MQPSRGSEAV SVHHLVYKAQ QLQAEAKARK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-112	FAR1 family protein