PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014152.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB
Protein Properties Length: 307aa    MW: 34735.8 Da    PI: 7.3222
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014152.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.9e-072872345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT eE +l+ +a +++ ++   +W ++a++++ g+t  +++  + 
      PCP014152.1 28 EWTVEENKLFENALALYDKDtpdRWLRVAAMIP-GKTVGDVIKQYK 72
                     5********************************.****99988775 PP
2Myb_DNA-binding44.14.8e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      PCP014152.1 135 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 179
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MFRGMEIPSP TSYLQNSNWL FEESTGAEWT VEENKLFENA LALYDKDTPD RWLRVAAMIP  60
GKTVGDVIKQ YKELEEDVSD IEAGLIPIPG YTSNNFTTEW VNNQGFDGLE QFYSVGGKRS  120
ASTRPADQER KKGVPWTEEE HRQFLMGLKK YGKGDWRNIS RNFVITRTPT QVASHAQKYF  180
IRQLTGGKDK RRSSIHDITT VNLPDVKPAS PDSTSKSPPS SNHSSTVVQQ RHQHQKLASM  240
SIDWKSPDEG QQMVFGSANG NNFMGPFCGM SSHVPKLEEK NFLSGNLHGS QLGHYNACFE  300
MQSMRYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-119MYB family protein