PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP014137.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 32255.3 Da PI: 8.2941 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.7 | 7.6e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ Ed ll ++++ +G g+W++ +++ g+ R++k+c++rw +yl PCP014137.1 14 RGPWSNREDTLLTQYIEAHGEGQWRSLPEKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eEd+l+++++ +lG++ W++Ia +++ gRt++++k++w++ PCP014137.1 67 RGNITSEEDDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7999******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MGRAPCCSKV GLNRGPWSNR EDTLLTQYIE AHGEGQWRSL PEKAGLLRCG KSCRLRWMNY 60 LKPDIKRGNI TSEEDDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKRLISEG 120 TDPNTHKKLS EPIAKENKRR ENQSCKNRNN KKEMVKVMMK SKMKPGQHVE PQKPKVHLPK 180 PTRITSFLSL PRNDSSTSST TVTPASSIQD LNGGEGGAFG VNPWCNNGVV PCVGDPDQDP 240 INSSADGGDD HTLENLYEEY LQALLTDHHH DHQNQLELDS FADSLLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-68 | MYB family protein |