PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014050.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 435aa MW: 48840.2 Da PI: 6.6615

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014050.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.9	2.1e-14	107	196	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +kv++ps v+ +l l kf +eh+ k ++ +++lede+gr++e k+ ++k++ l++GW++F +++ gD v+F+l+ +f +v ++r+ PCP014050.1 107 LKVMMPSQVSGGFCLNLATKFRREHMPK--QDSMIVLEDENGREFETKYLVEKGG----LSGGWRGFSIVHKIMKGDAVIFHLVTPYKF--KVYIIRS 196 69*********************744..6669***********666666....9********************9876666..8888775 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MVEAMAILQD QKQSSTNPLL LLPPPPPPHK GMATEKPFGQ KPPCLQLKTT NVLNAKTNPI 60 MLECRKRKTP VRVTVESLYE SSQAQSSVME RAKKIEASLN PRFPSLLKVM MPSQVSGGFC 120 LNLATKFRRE HMPKQDSMIV LEDENGREFE TKYLVEKGGL SGGWRGFSIV HKIMKGDAVI 180 FHLVTPYKFK VYIIRSNEVD CNFPLMRVDP PIKQVDTGGV TARGKGREIL EPIPQENAIV 240 CYTDSGPISD QSENDCVDVG SEFLDGLRLS ESVVTFKEVN CLENFNVQVN GLIINSEFSK 300 YVMTKYYELC CSQNSFLHGQ LLEGLNCKLI AGVISETVNI ADAIRACKIT TPEDYLSTWD 360 KTLKAFDDLG MNVRFLRARL DQLASFASKS RRPKEANVLE VKEAMDSRLD SEIETPNRSS 420 EEQEIMFQEV AKAPW

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MVEAMAILQD QKQSSTNPLL LLPPPPPPHK GMATEKPFGQ KPPCLQLKTT NVLNAKTNPI  60
MLECRKRKTP VRVTVESLYE SSQAQSSVME RAKKIEASLN PRFPSLLKVM MPSQVSGGFC  120
LNLATKFRRE HMPKQDSMIV LEDENGREFE TKYLVEKGGL SGGWRGFSIV HKIMKGDAVI  180
FHLVTPYKFK VYIIRSNEVD CNFPLMRVDP PIKQVDTGGV TARGKGREIL EPIPQENAIV  240
CYTDSGPISD QSENDCVDVG SEFLDGLRLS ESVVTFKEVN CLENFNVQVN GLIINSEFSK  300
YVMTKYYELC CSQNSFLHGQ LLEGLNCKLI AGVISETVNI ADAIRACKIT TPEDYLSTWD  360
KTLKAFDDLG MNVRFLRARL DQLASFASKS RRPKEANVLE VKEAMDSRLD SEIETPNRSS  420
EEQEIMFQEV AKAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-35	B3 family protein