PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP014049.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 494aa MW: 55528.6 Da PI: 5.6072

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP014049.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.8	1.1e-14	162	236	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 lpkkf+ eh ++++++++ledesg+++ k+ +k + l++GW++F a++L egD+vvF++ + ++l+v ++r+ PCP014049.1 162 GLPKKFCCEHL--PKQDTMIVLEDESGEEFYTKYLLEKVG----LSGGWRRFSIAHDLLEGDVVVFHVL--TPTKLKVYIVRS 236 79***9995..347789***********655555....*********************43..677789999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MMTLLLKITP SFISKYKAER VVRFDQEETA WGLFVNWLIG AACDGELVMD VYYKAKNWEK 60 ELSNRGRPPK EEEKLPSKKS SCLKPTTKSI VVSANPKSNK RKRATVDSLY GTCQAQSSVL 120 ERAKEVEATL DPRLPVLLKV MLPSHVTGGF WLVNPNLTLF TGLPKKFCCE HLPKQDTMIV 180 LEDESGEEFY TKYLLEKVGL SGGWRRFSIA HDLLEGDVVV FHVLTPTKLK VYIVRSNGSD 240 DLDGALGLMR LDACTKQMDT GDIVACERED SENLESIPED NAIAFDTKSG PSLDHSGNDS 300 ENLDFEVLDG LRLSETVVTF EEVNCMENFN VLVNGLNINS VFSKHILRKY YELCCSQNAF 360 LHEQLIEGLN CKLVAGVISE TVNIADAIRA CKRTTSKGNF STWDTTLKAF DDLGMNVGFL 420 RARLDHLASL ALKSKRFKEA KLEKDRAEEE KRNLEAKLVE VQSGINRLDS EMKTLNTSSE 480 KLELMFQEVA KAPW

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MMTLLLKITP SFISKYKAER VVRFDQEETA WGLFVNWLIG AACDGELVMD VYYKAKNWEK  60
ELSNRGRPPK EEEKLPSKKS SCLKPTTKSI VVSANPKSNK RKRATVDSLY GTCQAQSSVL  120
ERAKEVEATL DPRLPVLLKV MLPSHVTGGF WLVNPNLTLF TGLPKKFCCE HLPKQDTMIV  180
LEDESGEEFY TKYLLEKVGL SGGWRRFSIA HDLLEGDVVV FHVLTPTKLK VYIVRSNGSD  240
DLDGALGLMR LDACTKQMDT GDIVACERED SENLESIPED NAIAFDTKSG PSLDHSGNDS  300
ENLDFEVLDG LRLSETVVTF EEVNCMENFN VLVNGLNINS VFSKHILRKY YELCCSQNAF  360
LHEQLIEGLN CKLVAGVISE TVNIADAIRA CKRTTSKGNF STWDTTLKAF DDLGMNVGFL  420
RARLDHLASL ALKSKRFKEA KLEKDRAEEE KRNLEAKLVE VQSGINRLDS EMKTLNTSSE  480
KLELMFQEVA KAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-35	B3 family protein