PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013975.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 469aa MW: 52632.9 Da PI: 5.2645

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013975.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.9	1.8e-11	17	58	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +Ed++l + + ++G+++W+ Ia+++ +t qc+ rw++yl PCP013975.1 17 LQEDDILRNQISLHGTENWAVIASKFK-DKTTRQCRRRWYTYL 58 68**********************9.***********97 PP
2	Myb_DNA-binding	43.7	6.5e-14	64	107	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + PCP013975.1 64 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 107 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MFLWFISDMG SGCSFELQED DILRNQISLH GTENWAVIAS KFKDKTTRQC RRRWYTYLNS 60 DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK KRAKYEALAK 120 ENAKSYINQN DKRVIIRNGF NTDGTTETTA PPKKMRRSHI PSLPKNCTSG DRLLEQCGKI 180 NQQLRPPFTV LIQNAHNVEN LQDQHNGHSP KEFPGNAVQN GKFQGSFLKK DDPKIIALMQ 240 QAELLSSLAL KVNSENTDQS LENAWMVLQD FLNQSKDSDI LSYGIDDFDF QLEDLKYLLE 300 DLRSTTAGSG PSWQQPDLYN DSPGSSEYST GSTLLSQTES YQVEQNEVEI GSPNQEIRLG 360 SHSIPIEGQN DVGDCEKGIV SEKQEIFPSC DEATKDYAVV SVSSNTEFTS PIKVTPLFRS 420 LAAGIPSPKF SESERNFLLK TLGEDSPCPI PSTNPSQPPP CKRSLLQSL

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MFLWFISDMG SGCSFELQED DILRNQISLH GTENWAVIAS KFKDKTTRQC RRRWYTYLNS  60
DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK KRAKYEALAK  120
ENAKSYINQN DKRVIIRNGF NTDGTTETTA PPKKMRRSHI PSLPKNCTSG DRLLEQCGKI  180
NQQLRPPFTV LIQNAHNVEN LQDQHNGHSP KEFPGNAVQN GKFQGSFLKK DDPKIIALMQ  240
QAELLSSLAL KVNSENTDQS LENAWMVLQD FLNQSKDSDI LSYGIDDFDF QLEDLKYLLE  300
DLRSTTAGSG PSWQQPDLYN DSPGSSEYST GSTLLSQTES YQVEQNEVEI GSPNQEIRLG  360
SHSIPIEGQN DVGDCEKGIV SEKQEIFPSC DEATKDYAVV SVSSNTEFTS PIKVTPLFRS  420
LAAGIPSPKF SESERNFLLK TLGEDSPCPI PSTNPSQPPP CKRSLLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-153	MYB family protein