PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013795.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 269aa    MW: 29286.4 Da    PI: 9.4766
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013795.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002181103123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C + F ++  L  H++ H
  PCP013795.1  81 FSCNYCQRKFYSSQALGGHQNAH 103
                  89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEAPNAKNQQ LVHDHHQEHP QAQNPNLALD LSLSNKESNH GAKLELNLIN CFDSNNTSGN  60
SSSETSSPKG TTTTDFEPRV FSCNYCQRKF YSSQALGGHQ NAHKRERTLA KKGLKSNCAA  120
AEADALDRLP SLLSSYRFSS MASLPLHGSF NNRSLGIQVH STIHKPCYQT NTIGGHNGNS  180
GWLRRPIDQQ PAIGRLVPPS NVFHVQGGGI GSSSSSSSGG VGRFSYSTNV RKFSPETEGI  240
GGLWWSKSSV GHFNTKQDEL QKLDLSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.11e-40C2H2 family protein