PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013753.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 329aa MW: 36780.3 Da PI: 7.0786

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013753.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q+G+++W++I++ g+ R++k+c++rw +yl PCP013753.1 14 RGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP
2	Myb_DNA-binding	45.4	1.9e-14	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ E++ +v+++ G++ W++Ia+ ++ gRt++++k++w++ PCP013753.1 68 GQFSDAEEQTIVKYHSVVGNR-WSLIAAQLP-GRTDNDVKNHWNT 110 7899***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGQF SDAEEQTIVK YHSVVGNRWS LIAAQLPGRT DNDVKNHWNT KLKKKLSGMG 120 IDPVTHKPFS HLMAEIATTL APPQVTHLAE AALGCFKDEM LHLLMKKRID FHQHTNPTPG 180 NSTATYINGK QEEKDDTVKK IKIGLSRAMQ EQPDMLTSNK SWMDTIGATS ANFTGNCSDF 240 PLPMSGFQYG HSTFGNEGDG SPWSQSLCTG STCTGVADQQ GQLPDKLEVE ENGEESEGRK 300 ELRNGSSNIF NSDSLLWDLP SDDLMNQMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	1e-119	MYB family protein