PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013459.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 417aa MW: 46102.7 Da PI: 7.0874

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013459.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.6e-34	33	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl PCP013459.1 33 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 87 79****************************************************8 PP
2	Myb_DNA-binding	65.8	7.8e-21	35	86	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ PCP013459.1 35 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 86 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MPNIPSERHL FLQQGDQNSP AGDSGLVLST DAKPRLKWTP DLHERFIEAV NQLGGADKAT 60 PKTVMKLMGI PGLTLYHLKS HLQKYRLSKN LHGGHVTSSL TKIGPVPVSV AGERLISEAN 120 GSQMSTTSTG IAPQSNKGLH ITETLEMQIE VQRRLHEQLE VQRHLQLRIE SQGKYLQSVL 180 EKAQETLGRQ NLGTVGLEAA QVQLSELVSK VSTQCLNSSF TELKELQGLC PQQTQTNQQP 240 TDCSMDSCLT FCEGSKKDQD QIHSSGVPLR PNYNGRVTAV LEQKDTERAQ PPMLQNTSQL 300 NWCEDMKENN MFISSISKDA EKRMFPAAET RSSDLSMSIG LQGERWNLDS KGRDSDGSFL 360 ERTNSSRADS AKVKGAKVSQ GYRSVPYFAA KLDLNAHDDN DASSSCRQFD LNGFSWS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MPNIPSERHL FLQQGDQNSP AGDSGLVLST DAKPRLKWTP DLHERFIEAV NQLGGADKAT  60
PKTVMKLMGI PGLTLYHLKS HLQKYRLSKN LHGGHVTSSL TKIGPVPVSV AGERLISEAN  120
GSQMSTTSTG IAPQSNKGLH ITETLEMQIE VQRRLHEQLE VQRHLQLRIE SQGKYLQSVL  180
EKAQETLGRQ NLGTVGLEAA QVQLSELVSK VSTQCLNSSF TELKELQGLC PQQTQTNQQP  240
TDCSMDSCLT FCEGSKKDQD QIHSSGVPLR PNYNGRVTAV LEQKDTERAQ PPMLQNTSQL  300
NWCEDMKENN MFISSISKDA EKRMFPAAET RSSDLSMSIG LQGERWNLDS KGRDSDGSFL  360
ERTNSSRADS AKVKGAKVSQ GYRSVPYFAA KLDLNAHDDN DASSSCRQFD LNGFSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-127	G2-like family protein