PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013441.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 433aa    MW: 50467.4 Da    PI: 7.2874
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013441.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.54.3e-31110214199
                  EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                  f+kv tpsdv+k++rlv+pk++ae++    ++++ ++  l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  + +l
  PCP013441.1 110 FDKVVTPSDVGKLNRLVIPKQHAERYfpldSSSNDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGvGElGKDRL 207
                  89***************************9555568889************************************************66699999999 PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  ++ ++r+
  PCP013441.1 208 YIDWRRR 214
                  9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MDFMQRDQKG YSDKEDQDQE QEDQEEEEDI ITTSNSNSGS SPKYKGILLP PPPPHYHQQY  60
GQQKPWLDAQ NHSSPEAINF MDLSLNKDQV SDGGTDPNYW PPNSEREHMF DKVVTPSDVG  120
KLNRLVIPKQ HAERYFPLDS SSNDKGLLLN FQDRTGKPWR FRYSYWNSSQ SYVMTKGWSR  180
FVKEKKLDAG DIVSFERGVG ELGKDRLYID WRRRPPPSLP PQLHPHNHYG GGRLYSLLQR  240
PLPSSVMSSM PLRHHEHFLH SNNNVHHPYH HQHHNYQIMN QQYLPHQLHQ LQGGRDQHVI  300
HHQYPMVIDS VPFYQHGNYK NSATSTSSAS VASSAGKKLR LFGVNMECSS SPIEEDDHQE  360
CQYCLQQQYP INLIIIIFHH RHLHWLFLHS NSLGCPIQVV VVLHQIITSP QTKGNLQLRF  420
IWIPREFDRL LCQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-61B3 family protein