PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP013150.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 822aa MW: 91391 Da PI: 6.4132

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP013150.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.5	7.9e-21	641	737	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ ++ +++ PCP013150.1 641 QKVLKQSDVGSLGRIVLPKKEAETHlpELDARDGISIAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCNKYM 735 79***********************99999*****7778*****777777777777.******************..555888777 PP EE CS B3 94 vk 95 ++ PCP013150.1 736 IR 737 66 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
MKREQVQVQV PVLHHHQDLH AEDQEDTLGV DPREMWLDDS QETALLADIN DPSIFYNDHF 60 PPLPDFPCMS SSSSSSSTPA PVKPATCSSS SSSVSSSSSA ASWAILKSDA EPEDGERKQQ 120 PNQNSYHHQH SQIDDQTVDA HALSSTASME ISQPLDLSGG GGGIDCMDET ETFGYMDLFE 180 PNEFFDPSSI FQSDSLFMEQ FQQDQDNQQL AMAQLLQDHH ETVTTIQSNP QQQKQVVGHD 240 EENTNKDLSN EDKDPDDMAM VFLEWLRSNR ETVSAEDLRS VKIKKSTIEC AARRLGGGKE 300 AMKQLLKLVL EWVQTNHLQK RRSNSIITKD SNIITQQQYQ DPFLNPNPNP SSRVFESNPS 360 RNFTQTQWMA PPPHAAAYDP AAGGLLIPTP PPAPPPPATY PSMMGYMAAD PLGNGPSPYQ 420 TSPEYHHHMI ESGQPSWPSS LFGMGTAPYG SFQDNNIHLA PPLHHPQAFA GYGSQYQPYQ 480 YFPGNGEHQL MRLGSSATKE ARKKRMARQR RLVSHHRHHG HQQNSQQLNN QMPDHHHLQQ 540 TRLVGNTTDL NCTGAVPLQA NPGNWFYWPT ATAAPSPSAV AMMPSIMQEA APLPPVQQMD 600 RPASTQAQNY NHGRSAVQER QERQERRQGW KSEKNLKFLL QKVLKQSDVG SLGRIVLPKK 660 EAETHLPELD ARDGISIAME DIGTSRVWNM RYRYWPNNKS RMYLLENTGD FVRANGLQEG 720 DFIVIYSDVK CNKYMIRGVK VRQAGPKSER QAGPKSEGNK RPGKSQRNQH ASTPPGNNGS 780 SPSSATTAHK KERVNGSSHD NIDGNNIGGD GSDNEGGANS KV

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

MKREQVQVQV PVLHHHQDLH AEDQEDTLGV DPREMWLDDS QETALLADIN DPSIFYNDHF  60
PPLPDFPCMS SSSSSSSTPA PVKPATCSSS SSSVSSSSSA ASWAILKSDA EPEDGERKQQ  120
PNQNSYHHQH SQIDDQTVDA HALSSTASME ISQPLDLSGG GGGIDCMDET ETFGYMDLFE  180
PNEFFDPSSI FQSDSLFMEQ FQQDQDNQQL AMAQLLQDHH ETVTTIQSNP QQQKQVVGHD  240
EENTNKDLSN EDKDPDDMAM VFLEWLRSNR ETVSAEDLRS VKIKKSTIEC AARRLGGGKE  300
AMKQLLKLVL EWVQTNHLQK RRSNSIITKD SNIITQQQYQ DPFLNPNPNP SSRVFESNPS  360
RNFTQTQWMA PPPHAAAYDP AAGGLLIPTP PPAPPPPATY PSMMGYMAAD PLGNGPSPYQ  420
TSPEYHHHMI ESGQPSWPSS LFGMGTAPYG SFQDNNIHLA PPLHHPQAFA GYGSQYQPYQ  480
YFPGNGEHQL MRLGSSATKE ARKKRMARQR RLVSHHRHHG HQQNSQQLNN QMPDHHHLQQ  540
TRLVGNTTDL NCTGAVPLQA NPGNWFYWPT ATAAPSPSAV AMMPSIMQEA APLPPVQQMD  600
RPASTQAQNY NHGRSAVQER QERQERRQGW KSEKNLKFLL QKVLKQSDVG SLGRIVLPKK  660
EAETHLPELD ARDGISIAME DIGTSRVWNM RYRYWPNNKS RMYLLENTGD FVRANGLQEG  720
DFIVIYSDVK CNKYMIRGVK VRQAGPKSER QAGPKSEGNK RPGKSQRNQH ASTPPGNNGS  780
SPSSATTAHK KERVNGSSHD NIDGNNIGGD GSDNEGGANS KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	5e-88	B3 family protein