PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP013073.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 324aa    MW: 35440 Da    PI: 6.4361
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP013073.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.5e-32168225259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  PCP013073.1 168 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCTVKKRVERSSEDPTTVITTYEGQHCHH 225
                  8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDDNNEKHDP LTTTEFTTQS TWPPGSDSVY FFSTTHDRDS NILSDFGWNF NPDASKPDEV  60
FPCLDPIAAA DDMSDLAGNT SSSPLVLENS SSSSSPAFRS SDLAPVVGSA STNQSASTSS  120
SEDPPERSAG SGGKPPPEIQ SKVKKKGPKR IRQQRFAFVT KSEVDHLEDG YRWRKYGQKA  180
VKNSPFPRSY YRCTNTKCTV KKRVERSSED PTTVITTYEG QHCHHTVAFP RGGVIGHESS  240
FAGHQLAQLS PASQFMYYPT IRPREITSPI NLTPTASHQA VVPRHDDDQA AGGSSHFIDP  300
QPTPPLPTDE GLLGDIVPLG MRNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.25e-64WRKY family protein