PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012995.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 304aa MW: 33350.6 Da PI: 7.6505

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012995.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.1	1.8e-19	6	67	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r psae++ ++++kl +++ ++V++WFqN++a+e++ PCP012995.1 6 STRWTPTTDQIKILKDLYYNngIRSPSAEQIHRISAKLrqygKIEGKNVFYWFQNHKARERQ 67 58***************8567***********************************97 PP
2	Wus_type_Homeobox	113.1	1.4e-36	5	69	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++QikiL++ly+ +G+r+P++e+i+ri+a+L++yGkie+kNVfyWFQN+kaRerqk+ PCP012995.1 5 SSTRWTPTTDQIKILKDLYYnNGIRSPSAEQIHRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 69 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MCRQSSTRWT PTTDQIKILK DLYYNNGIRS PSAEQIHRIS AKLRQYGKIE GKNVFYWFQN 60 HKARERQKKR FTSSSAPDNH AAPPMPAVPP QADNIRQRSS GFGIDINATA AAAYEQLPIN 120 HHSKYSNISG SPAGFSSASS SSVGVNVSAG AQMGNYGYGS MAMEKSFRDC SLSSGGSTST 180 GHVGGSNYNN FNHNPGWVGV DPYSSPYTIF DKKSPSKQVF GDQENMTEEE YYNQQASPEI 240 ETLPLFPMHG EDIHGFGNIK SSSMEGYYSG WYRSDGGNDG GSRTSLELSL NSYSHMTPDC 300 FGSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	7e-50	WOX family protein