PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012965.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 554aa MW: 62610 Da PI: 6.5628

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012965.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.8	5.6e-14	466	520	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++ rr+++NRe+ArrsR RKk ++e L+ v+ L+ eN++Lk++l +++ l PCP012965.1 466 RKRRRMMSNRESARRSRWRKKRRLEDLTSDVDRLKIENQELKNRLGLVAQKCHVL 520 5789*******************************************99999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MLPIEMLGHG EDTPSRFELL SMVKKHSSLL GKTVIVADED DTSDVELDHR FWHDVLDLYF 60 VRGKDSRGRQ DDDLVFFVRK LSSYGYGFND GKEGVSPYFV RRWAPKLDDL IGESNVDVDW 120 RRSFYLNLIA HTSFTVTVAI CSHQDLRNHQ AEQGIPLSPI YKVVKTVYAS PSRVNFQLDS 180 KKASLDICFA IDDFDSTFDA VVLTETDHCY CVILNAHDGA AFPREKESND CSSSDSSSLR 240 VETNSAKMKN TKLTLFSGFV SYQMVRDAYD DQSQQDLGPF SPVISKRGFG IGSIVRKAAS 300 VASVAAKNAY AAASSTHSFD DEMVPLKCCL MSISLPWEQI AYDLLFKKRH VLGTRNNVTT 360 EVCFSDTGWI PCVSFPSIIN TQPLLFVPSL FSSFPPPLPF TQMMMSSSAM SFIHEPSHMG 420 HFECPVQETV LTTAEIQELL SLLQAGNSAS PSSEGSNREV DTVDERKRRR MMSNRESARR 480 SRWRKKRRLE DLTSDVDRLK IENQELKNRL GLVAQKCHVL WRENDRMTSE SLALRARLSD 540 LYRILIAMQT QCSQ

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MLPIEMLGHG EDTPSRFELL SMVKKHSSLL GKTVIVADED DTSDVELDHR FWHDVLDLYF  60
VRGKDSRGRQ DDDLVFFVRK LSSYGYGFND GKEGVSPYFV RRWAPKLDDL IGESNVDVDW  120
RRSFYLNLIA HTSFTVTVAI CSHQDLRNHQ AEQGIPLSPI YKVVKTVYAS PSRVNFQLDS  180
KKASLDICFA IDDFDSTFDA VVLTETDHCY CVILNAHDGA AFPREKESND CSSSDSSSLR  240
VETNSAKMKN TKLTLFSGFV SYQMVRDAYD DQSQQDLGPF SPVISKRGFG IGSIVRKAAS  300
VASVAAKNAY AAASSTHSFD DEMVPLKCCL MSISLPWEQI AYDLLFKKRH VLGTRNNVTT  360
EVCFSDTGWI PCVSFPSIIN TQPLLFVPSL FSSFPPPLPF TQMMMSSSAM SFIHEPSHMG  420
HFECPVQETV LTTAEIQELL SLLQAGNSAS PSSEGSNREV DTVDERKRRR MMSNRESARR  480
SRWRKKRRLE DLTSDVDRLK IENQELKNRL GLVAQKCHVL WRENDRMTSE SLALRARLSD  540
LYRILIAMQT QCSQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	466	470	RKRRR
2	466	488	RKRRRMMSNRESARRSRWRKKRR
3	467	489	RKRRRMMSNRESARRSRWRKKRR
4	468	490	RKRRRMMSNRESARRSRWRKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59530.1	1e-22	bZIP family protein