PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 33224.9 Da PI: 7.3318 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.5 | 1.8e-14 | 14 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+ + + +G++ +W +++ g++R++k+c++rw++yl PCP012942.1 14 RGPWSPEEDAALKSYLQSHGSDgtasNWIHLPKKAGLRRCGKSCRLRWLNYL 65 89************************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.9 | 1.3e-14 | 72 | 131 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ +q+G++ +W+ Ia++m+ gRt++++k++w++ PCP012942.1 72 GGFTEEEDSIICNLYNQMGSRqyfltylqflnspnflRWSVIASYMP-GRTDNDVKNYWNT 131 569********************************************.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MGRTPCCDKE NVKRGPWSPE EDAALKSYLQ SHGSDGTASN WIHLPKKAGL RRCGKSCRLR 60 WLNYLRPDIK HGGFTEEEDS IICNLYNQMG SRQYFLTYLQ FLNSPNFLRW SVIASYMPGR 120 TDNDVKNYWN TKLKKKLLGG KIKNISSREP TVANNANFSG IPEAEKPQDS TFWTSQTQVP 180 STLQMLYDVN SGLSADNQTM SLNPDQLYNP KLSGFSDFGA RSRGSYSTTV SLSQEGSSVS 240 DSSSIAGNRY LDQDYGFLMD YGFGVAYDNN VNHYGMCFGD KTSEVGPTGC TDFGDFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 2e-58 | MYB family protein |