PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012919.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 29733.2 Da PI: 5.3148 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed++l+d+v+++G g+W++ +r+ g++R++k+c++rw++yl PCP012919.1 14 RGAWTDAEDQILLDYVREHGEGRWEKLSRETGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++ PCP012919.1 67 RGNITQEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSI 111 7999******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGRSSRCEKD GLRRGAWTDA EDQILLDYVR EHGEGRWEKL SRETGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TQEEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS ILRKKAKENQ 120 SERSRNERKT IEDLATEAAS SVETDSHFTK EERRPANNGI EEKNTEPEPD CHDGFLPNTS 180 DSDMPRNFIT DLNEGQLSIS EFLHTDFTKL CELNMKIVDC TNNCRNGSLM STATTEAPLH 240 LEELLNDWEA YDFYLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 5e-59 | MYB family protein |