PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 27899.5 Da PI: 5.2322 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.5 | 1.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l+d+++ +G g W+ +++ g++R++k+c++rw++yl PCP012918.1 14 RGPWTALEDKMLADYIQAHGEGKWSNVPKQAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.2 | 1.6e-12 | 70 | 109 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 T++E++l+++++k+lG++ W++Ia +++ gRt ++ ++w+ PCP012918.1 70 ITKDEEDLIIRLHKLLGNR-WSLIAGRIP-GRTKDEIENYWH 109 59*****************.*********.***********7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRNPCCSKE GVKRGPWTAL EDKMLADYIQ AHGEGKWSNV PKQAGLKRCG KSCRLRWLNY 60 LRPSIKGGDI TKDEEDLIIR LHKLLGNRWS LIAGRIPGRT KDEIENYWHC KLCKKQQEDH 120 ILSCRPSTST EIADTVQQSK VEVHLENDPS CNNNFALGSS MLCDLTDIMA EESETSSGSL 180 LSASKSREED RSSCWENILM EDFHTREMSL SEFLDTDFTK LSNVFGFGMC DVMSNEVLLE 240 GESGYGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-55 | MYB family protein |