PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012496.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 270aa MW: 30334.9 Da PI: 8.9471

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012496.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103	1.7e-32	191	249	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PCP012496.1 191 LDDGYKWRKYGQKVVKNTQHPRSYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHS 249 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MASRTSQAAV LNQQQQLGLF ENQEGEGCNT QMGFFPFPPN LIFSSLPFLG HQSLKGGFST 60 ASIASDDAPS TTTLSETLVP RPSLTPPPPR HKQDHNISTT SSEFGGGGGG GAHAHLLSLQ 120 RSTANLWAWG DVNDDRDEYC LNSKRSSGGD DHHHPYLGGV SAMKMKKMKA IRRKVREPRF 180 CFKTLSDVDV LDDGYKWRKY GQKVVKNTQH PRSYYRCTMD NCRVKKRVER LAEDPRMVIT 240 TYEGRHVHSP SHDLEDQDSR SPSHLNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	2e-58	WRKY family protein