PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012382.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 191aa    MW: 21574.4 Da    PI: 6.3016
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012382.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000153557123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C++ F++   L  H++ H
  PCP012382.1 35 YECTFCKRGFTNAQALGGHMNIH 57
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MESWRPRSPE TSSSDEDQVR DDDHDSGATT VKRSYECTFC KRGFTNAQAL GGHMNIHRKD  60
RAKAKQLISG TSSLNSNHYS NEDQYISMST SHHHQYSSAP ISSQGASGYY PVLDQMNYQM  120
YFQPNGSKPR IPYGYDHDDS SVGSRSQSLG MNQELCGANL SLRLEDDEFR RGVRSNDEVD  180
LELRLGNGRF M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.16e-16C2H2 family protein