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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP012233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 477aa MW: 52866.9 Da PI: 8.3234 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.4 | 3e-17 | 135 | 184 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g PCP012233.1 135 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 184 78*******************......55************************998 PP | |||||||
2 | AP2 | 40.6 | 6.4e-13 | 227 | 277 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ + +g PCP012233.1 227 SKFRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIECNG 277 79********.7******5553..2.26**********99**********98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MLDLNLGFVS HDVVPDSHHK LLSTTPIESS ESFNSSSNLT LAGEDDDNSA TLNFLAPNDD 60 VSANHYDGRR TIQLFPLAQS VRSSSSSSAS KKQWLGRSSG SRLELEPIYY APAEQRIAPP 120 QQVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHS AARAYDRAAI 180 KFRGTEADIN FSVSDYEDDI KQMSNFTKEQ FVHILRRQST GFSRGSSKFR GVTLHKCGRW 240 EARMGQFLGK KYIYLGLFDS EIEAARAYDK AAIECNGREA VTNFDSSSYD GELMSEANNK 300 GSHQNLDLNL GIAPPFVSEI QKENINLSSF PFQLGCDGIP IHTRARNANS VPAPMRSQLS 360 HGSMVASEVP PIMSNMNSSF FPIHMERAME KSMDVNLFPS RAWQLQDLNG GPTSMPLFSA 420 AASSGFPSST ATSSSSAVTQ LHFPNKAILR HHFSTYSPPT PPIFIAEAEN QKQFTIG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-95 | AP2 family protein |