PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012233.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family AP2
Protein Properties Length: 477aa    MW: 52866.9 Da    PI: 8.3234
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012233.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43e-17135184155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PCP012233.1 135 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 184
                  78*******************......55************************998 PP

2AP240.66.4e-13227277155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s+++GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ + +g
  PCP012233.1 227 SKFRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAAIECNG 277
                  79********.7******5553..2.26**********99**********98766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MLDLNLGFVS HDVVPDSHHK LLSTTPIESS ESFNSSSNLT LAGEDDDNSA TLNFLAPNDD  60
VSANHYDGRR TIQLFPLAQS VRSSSSSSAS KKQWLGRSSG SRLELEPIYY APAEQRIAPP  120
QQVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV YLGGFDTAHS AARAYDRAAI  180
KFRGTEADIN FSVSDYEDDI KQMSNFTKEQ FVHILRRQST GFSRGSSKFR GVTLHKCGRW  240
EARMGQFLGK KYIYLGLFDS EIEAARAYDK AAIECNGREA VTNFDSSSYD GELMSEANNK  300
GSHQNLDLNL GIAPPFVSEI QKENINLSSF PFQLGCDGIP IHTRARNANS VPAPMRSQLS  360
HGSMVASEVP PIMSNMNSSF FPIHMERAME KSMDVNLFPS RAWQLQDLNG GPTSMPLFSA  420
AASSGFPSST ATSSSSAVTQ LHFPNKAILR HHFSTYSPPT PPIFIAEAEN QKQFTIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-95AP2 family protein