PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012076.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 325aa    MW: 36322.7 Da    PI: 10.4412
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012076.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.59e-31264321359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp ++++tYegeH+h+
  PCP012076.1 264 DEFSWRKYGQKPIKGSPYPRGYYKCSSIrGCPARKHVERCLEDPAMLIVTYEGEHKHS 321
                  99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEEVEAANRA AVGSCHRVLN LLCKPKPWKN LQVETEVAVF KFKRVLSLLS HGRGRVRKLK  60
KNLNPPPFPQ NIFSDGPNYS DISPKPLQLL PPTFPKTPHA KKNFLGNPVL DANLKLPLQI  120
PKTKTLKQHQ EEGEKLQFHP QQVKYQSEMV FSGIDSGINL AFDRSSSSFN PSMTSARSFM  180
SCLSIGDGGE VITGRDSFRL INGVPRVSGQ SSQQQSRCTG VVENGSVNCG SSGKCQYPKK  240
RKLRVKRTFK VPAISDKTSD IPPDEFSWRK YGQKPIKGSP YPRGYYKCSS IRGCPARKHV  300
ERCLEDPAML IVTYEGEHKH SQSAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.12e-86WRKY family protein