PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP012075.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 353aa MW: 40581.5 Da PI: 10.2246

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP012075.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.5	1.9e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl PCP012075.1 4 RQRWGAEEDALLRAYVKQYGPREWNLVSQRMNtpLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.5	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + PCP012075.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MKERQRWGAE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKNKKITDPI 120 VEGKYDRILE TFAEKLVKER APTYLMATSN GAYLHTETSS PAPTILPPWL SNSNVSPNVR 180 PPSPSVTLSL SPTVAPSPPI PWLQQDRGSD GSFVVGNLPH HGVVPACGEN LVISELVECS 240 RELEEVHRAW VAHKKEASWR LRRVELQLDS EKACRRTEKM EEIEAKVKAL RKEQKAALDR 300 IEAEYREQLA GLRRDAEAKE QKLAEQWAAK HLRLSKFLEQ MGGRPRIVEP NGR

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MKERQRWGAE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKNKKITDPI  120
VEGKYDRILE TFAEKLVKER APTYLMATSN GAYLHTETSS PAPTILPPWL SNSNVSPNVR  180
PPSPSVTLSL SPTVAPSPPI PWLQQDRGSD GSFVVGNLPH HGVVPACGEN LVISELVECS  240
RELEEVHRAW VAHKKEASWR LRRVELQLDS EKACRRTEKM EEIEAKVKAL RKEQKAALDR  300
IEAEYREQLA GLRRDAEAKE QKLAEQWAAK HLRLSKFLEQ MGGRPRIVEP NGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-142	MYB family protein