PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP012049.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 332aa    MW: 36156.8 Da    PI: 10.1464
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP012049.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.3e-31261318359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d  ++++tYegeHnh+
  PCP012049.1 261 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAAMLVVTYEGEHNHS 318
                  99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAVDFMGYRN TITSSSTSSF SAKSEENAVQ EAASGLESVE KLIRLLSQAQ QNQHQGKYPS  60
TAMDMDCRAV ADVAVSKFKK VISLLGRTRT GHARFRRAPL TLSSGSTSQT QNQSQEILVK  120
HVPLPESTKV YHATPIQQIP PPHHHHHGTV LESTKDSSTT INFSYPPTTS FMSSLTGDSD  180
SKQPMSSSSF QITNLSQVSS AGKPPLSSAS LKRKCSSENL GSGKCGAGSS GRCHCKKRKL  240
RQKRVVRVPA ISLKLADIPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERA  300
LDDAAMLVVT YEGEHNHSLS VAETSNLILE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-76WRKY family protein