PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011763.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 337aa MW: 37250.7 Da PI: 7.6054

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011763.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.5e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed +l d++++ G g+W++ ++ g++R++k+c++rw +yl PCP011763.1 15 KGPWTMDEDAKLTDYIRRNGHGSWRALPKLAGLNRCGKSCRLRWINYL 62 79********************************************97 PP
2	Myb_DNA-binding	54.9	2e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ +++++ lG++ W++Ia +++ gRt++++k++w+++l PCP011763.1 68 RGKFSEEEERVIINLHSVLGNK-WSKIATHLP-GRTDNEIKNYWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MVRSPCCDEE NSLKKGPWTM DEDAKLTDYI RRNGHGSWRA LPKLAGLNRC GKSCRLRWIN 60 YLRPDIKRGK FSEEEERVII NLHSVLGNKW SKIATHLPGR TDNEIKNYWN THLRKKLLHM 120 GIDPNTHKPR TDLNHLLDLS SLLRAASVGN SNMMTSPWDN AMSLQAAAGA AQLAKMQLLQ 180 CLYMMPVVST SNSSVPPKNY NADVMNTTTN SHFGSHSLHL FGGGNMSGAS TILSGQKWNQ 240 QADKVDSFHA ISNLFEGFQG GFGAQGGINS NSTDQENTSS SCYGDIYVQT SNQPPPAFSS 300 AAVSPGTSST AIFDAWEKLM DDETSESYWK DILESIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17785.1	2e-77	MYB family protein