PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP011761.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 567aa MW: 63077.2 Da PI: 4.9825

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP011761.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	103.2	2.2e-32	45	185	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT........................ CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks........................ 74 Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+Y+ + + ++ ++k PCP011761.1 45 FLSKTYDMVDDPATDPVVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYDIDEKDGNRVREKCsteygrigrrkrkhyycqlfllps 141 9******************999*********************************999888877555899****************9 PP ................XTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 75 ................kekiweFkhksFkkgkkellekikrkks 102 +++ weF+++ F +g+k+ll++i+r+k PCP011761.1 142 lvhfflstkhegfrkiDPDRWEFANEGFLRGQKHLLKSINRRKP 185 999999988877765449**********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MEGANNNNGD EIPTAGGAHQ AYSGSSSAPA PAPAPLLNSN APPPFLSKTY DMVDDPATDP 60 VVSWSPTNNS FVVWNPPEFA RDLLPKYFKH NNFSSFVRQL NTYDIDEKDG NRVREKCSTE 120 YGRIGRRKRK HYYCQLFLLP SLVHFFLSTK HEGFRKIDPD RWEFANEGFL RGQKHLLKSI 180 NRRKPTHGHS HQQQQPSHGQ NSMGACVEVG KFGLEEEVER LKRDKNVLMQ ELIRLRQQQQ 240 STDNQLQTMV QRLQGMEQRQ QQMMSFLAKA MHSPDFFTQF VQKNESNRRI TEVNKKRRLK 300 QEGIAERERS NAPDGQIVKY QPPMNGAAKA MLRQIMNTDT SSRLESFNNN SDNFLISDGS 360 SSSSAIDSGS SSSHVSGVTL QEVPLTSVHG LPSAISETQS SLRTANSGTV MRSPFSDVNA 420 LVGEESPSIP IPQTNVNIPE LSQIADMSPE GLVDIPEESM AADDIGVGFI ENMASEAGDG 480 FMDPTSLVLN GSLPIDFDDI SSDIEAFLKD WDDVLQNPGS DEMDSICAGV PMENEKQQPT 540 ENGWDKTQNM DNLTEKMGLL TSETKGV

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MEGANNNNGD EIPTAGGAHQ AYSGSSSAPA PAPAPLLNSN APPPFLSKTY DMVDDPATDP  60
VVSWSPTNNS FVVWNPPEFA RDLLPKYFKH NNFSSFVRQL NTYDIDEKDG NRVREKCSTE  120
YGRIGRRKRK HYYCQLFLLP SLVHFFLSTK HEGFRKIDPD RWEFANEGFL RGQKHLLKSI  180
NRRKPTHGHS HQQQQPSHGQ NSMGACVEVG KFGLEEEVER LKRDKNVLMQ ELIRLRQQQQ  240
STDNQLQTMV QRLQGMEQRQ QQMMSFLAKA MHSPDFFTQF VQKNESNRRI TEVNKKRRLK  300
QEGIAERERS NAPDGQIVKY QPPMNGAAKA MLRQIMNTDT SSRLESFNNN SDNFLISDGS  360
SSSSAIDSGS SSSHVSGVTL QEVPLTSVHG LPSAISETQS SLRTANSGTV MRSPFSDVNA  420
LVGEESPSIP IPQTNVNIPE LSQIADMSPE GLVDIPEESM AADDIGVGFI ENMASEAGDG  480
FMDPTSLVLN GSLPIDFDDI SSDIEAFLKD WDDVLQNPGS DEMDSICAGV PMENEKQQPT  540
ENGWDKTQNM DNLTEKMGLL TSETKGV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	301	NKKRRLKQ
2	295	300	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-115	HSF family protein