PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP011299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | B3 | ||||||||
Protein Properties | Length: 161aa MW: 18448.5 Da PI: 8.8799 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.3 | 3.1e-14 | 75 | 138 | 1 | 59 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgry 59 f+kv psdv++++r+v+pk++ae+h g+ +++ l++ede g++W++ ++y+ +s+r+ PCP011299.1 75 FEKVAPPSDVGRLNRMVIPKQHAEKHfqvhlsvGLG--KGMLLKFEDEVGKVWRFGYCYWSSSQRM 138 899999********************9998877555..789**********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MTPYERDVTE ALFLESHSKA EIVDMLRKHS YANELEMYKH KLYNGGALGL DAGGKRMKCH 60 LDLMDTCSSE RELLFEKVAP PSDVGRLNRM VIPKQHAEKH FQVHLSVGLG KGMLLKFEDE 120 VGKVWRFGYC YWSSSQRMRW VKCGGLGIVI GVVVRVMYTL H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 1e-42 | RAV family protein |