PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP010902.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 324aa    MW: 35634.1 Da    PI: 7.4691
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP010902.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000155981123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C + F++   L  H+++H
  PCP010902.1 59 YSCSFCRRAFRSAQALGGHMNVH 81
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEQPRYWMWA KRKHNGLSSS NHDHHLQVPI SNDDSWEEQA FAEDAAGPLG GCIWPPRSYS  60
CSFCRRAFRS AQALGGHMNV HRRDRARLKQ SPNDETARHN HLHHHQDHDH SVQNSANNPS  120
SSSLGSFQFS SQQVCALVYN PKNPSSDPGT IATSSPSSVS RVSAQLPCKK NCAEQTLIPP  180
SSSSASSPQS SSVMGINRYY NKKSVERDHI KGDKISREVE SSSCREKGDH HVANNDRNLS  240
VSLNLVVCCA HTSASDDGDE AIVGSKRRRT DDVPSSIPFF LKSGSADKVH HVQSAEGFEI  300
SSSSIEDLDL ELRLGDQPKV ISVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-25C2H2 family protein