PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010737.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 369aa MW: 42368.3 Da PI: 9.939

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010737.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.1	1.8e-14	43	130	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ffkvl d ++++ l +p f+ +++gk ++ + l++ g +W v l +k+ +r +++kGWkeFv++ng + +f+vF++ ++ +f +v ++ PCP010737.1 43 FFKVL--VDDFSTQ-LQIPLAFLVHFDGKVPQ--ETHLQT-PGGTWPVSL--EKRNDRLFFQKGWKEFVQDNGFQLCEFLVFRYYEKLGF--YVDIYG 130 88999..8888887.******999777555..566555.6789*..*****************************8765555..777765 PP
2	B3	48.4	1.6e-15	233	323	1	94
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv ++ +++ g l lp f+++h e++ + tl+ ++gr W vk+ ++ + ++ + +GW+ Fvk+ngL+ gD++vF l+++ ef + v PCP010737.1 233 FFKVPLRFSYTHYGYLALPGMFVKAHLT--ERPSDATLRVSDGRIWPVKVGFDVAG-HCRFLSGWSLFVKDNGLEIGDICVFVLINKIEFLFEV 323 666666677778899*********63..366689999*******996665.444556******************99876664444 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MLNTHQTKVS SESLTISPFR RETLKRKKKM MMARSNAVRA PTFFKVLVDD FSTQLQIPLA 60 FLVHFDGKVP QETHLQTPGG TWPVSLEKRN DRLFFQKGWK EFVQDNGFQL CEFLVFRYYE 120 KLGFYVDIYG RNGCKKEFVA VIRKRDRPHE EAHGNAVHRK TPRNHGKQNV DNQGRKGLAH 180 GTGTSRATHA NIQIKDEVTN DREYELSMHR RATRTENAVA LQKGNGFEYR NPFFKVPLRF 240 SYTHYGYLAL PGMFVKAHLT ERPSDATLRV SDGRIWPVKV GFDVAGHCRF LSGWSLFVKD 300 NGLEIGDICV FVLINKIEFL FEVVLHRKIG AVSPTLSPAE DQFEVRNQDR SIIYEASSEE 360 MPPANEGQA

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MLNTHQTKVS SESLTISPFR RETLKRKKKM MMARSNAVRA PTFFKVLVDD FSTQLQIPLA  60
FLVHFDGKVP QETHLQTPGG TWPVSLEKRN DRLFFQKGWK EFVQDNGFQL CEFLVFRYYE  120
KLGFYVDIYG RNGCKKEFVA VIRKRDRPHE EAHGNAVHRK TPRNHGKQNV DNQGRKGLAH  180
GTGTSRATHA NIQIKDEVTN DREYELSMHR RATRTENAVA LQKGNGFEYR NPFFKVPLRF  240
SYTHYGYLAL PGMFVKAHLT ERPSDATLRV SDGRIWPVKV GFDVAGHCRF LSGWSLFVKD  300
NGLEIGDICV FVLINKIEFL FEVVLHRKIG AVSPTLSPAE DQFEVRNQDR SIIYEASSEE  360
MPPANEGQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18090.1	2e-21	B3 family protein