PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010665.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 470aa MW: 51521.1 Da PI: 8.807

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010665.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.4	6e-33	194	250	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k PCP010665.1 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 250 9*************************************.*************85 PP
2	WRKY	104	7.9e-33	394	450	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver ++dpk++++tYeg+Hnh+ PCP010665.1 394 DGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKHVERVSDDPKAFITTYEGKHNHD 450 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MDIKEAERVV IAKPVASRPT CSTFRSFTEL LAGAIDASPS NVSSETAVSA IRPKTVRFKP 60 LVNHAVDGLV SSQADISGGA HRHSLEKVSK PDSRSTVVYK PLAKVVSRAT VSVLANMGNF 120 NTCHQSTQAS VNADVLHPNQ DKSFRSQSVN LRHNNPSCAE TNQTTEPPKI VSQNMEEDQK 180 IIPSTANTDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI 240 VYKGEHNHSK PQPPKRSSSG TQGLGVASDG TGQDTNNRLC NSHLNERNEG SEGRLEDQNE 300 VGLPVHFYQS KALLRYDPLA SGGINAGGAA PDNSCGLSGE CEEGSKGLEA EDCEPRSKRR 360 KSENQSNEAG ISGEGVQDPR VVVQSSVESD MTGDGFRWRK YGQKVVKGNP YPRSYYRCTS 420 LKCNVRKHVE RVSDDPKAFI TTYEGKHNHD MPLRNANTGA SEKDTTKEKP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MDIKEAERVV IAKPVASRPT CSTFRSFTEL LAGAIDASPS NVSSETAVSA IRPKTVRFKP  60
LVNHAVDGLV SSQADISGGA HRHSLEKVSK PDSRSTVVYK PLAKVVSRAT VSVLANMGNF  120
NTCHQSTQAS VNADVLHPNQ DKSFRSQSVN LRHNNPSCAE TNQTTEPPKI VSQNMEEDQK  180
IIPSTANTDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCPVKKKVE RSLDGQIAEI  240
VYKGEHNHSK PQPPKRSSSG TQGLGVASDG TGQDTNNRLC NSHLNERNEG SEGRLEDQNE  300
VGLPVHFYQS KALLRYDPLA SGGINAGGAA PDNSCGLSGE CEEGSKGLEA EDCEPRSKRR  360
KSENQSNEAG ISGEGVQDPR VVVQSSVESD MTGDGFRWRK YGQKVVKGNP YPRSYYRCTS  420
LKCNVRKHVE RVSDDPKAFI TTYEGKHNHD MPLRNANTGA SEKDTTKEKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-118	WRKY family protein