PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010476.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 807aa MW: 90922.8 Da PI: 6.2677

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010476.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.8	7.2e-12	632	697	2	62
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvlt 62 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ PCP010476.1 632 QKVLKQSDVGSLGRIVLPKKEAETHlpELDARDGISIAMEDiGTSRVWNMRYRYwpNNKSRMYLLE 697 79***********************99999*****7778*******888888889987 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MKGEQVQVQV QVPVHHQLQD LHAGDLDTLG VDPRKMWLDD DQETALDVND PSIFYNDKFP 60 PLPDFPCMSS SSSSSSTPAP VKKVTCSSSS SSSAASWAVL KSDAKPEEGE RKQQQQHNSY 120 HHQYSQIDDQ TVDAHTLSST ASMEISQPLD LSGGIDCMDE MGTFGYMDLF ESNEFFDPSS 180 IFQSDSLFME QFQQDQDNQH LAMAHQLQDH HETATTIQSN PQQQKQVVGQ DEENTNKDQS 240 NDNKDPDDMA MVFLEWLRSN RETVSAEDLR SVKIKKSTIE CAARRLGGGK EAMKQLLKLV 300 LEWVQTNHLQ KRRSNSITTK DSNLVAQQQY QDPYQNPNPN SIPRVLESNP SCNFTQTPWM 360 APPPHATAYD PVAGGLLVPI PPPASPPPAA YPSMMGYMTA DPFGNGPSSY QPSPEYHHHM 420 IDSGQPSWPS SPFGMVTAPY GSFPDNNIHL APPQHHPQAF AGYSSQYQPY QYFPGNGERQ 480 LMRLGPSATK EARKKRMARQ RRLVSHHRHH GHQQNSQQLN NQMPDHNHLQ QTRFVGNTTD 540 LNCTGAVPLQ PNPGNWFYWP TATAALSPSA VAMMPSITPE AAPLPPVQQM DRPASNQAQN 600 YNQGRSAAQE RQERQERRQG WKSEKNLKFL LQKVLKQSDV GSLGRIVLPK KEAETHLPEL 660 DARDGISIAM EDIGTSRVWN MRYRYWPNNK SRMYLLENTD DTRSEGTASG AKIREQQKAG 720 KDTKEPACKH SSCQQWIVTF FSHNRTQENN SKVRDKGNER EDQLQHSHLF RFFSSLPCMN 780 RIEMDGEDSL GFVESQLIDD SLQIMAS

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MKGEQVQVQV QVPVHHQLQD LHAGDLDTLG VDPRKMWLDD DQETALDVND PSIFYNDKFP  60
PLPDFPCMSS SSSSSSTPAP VKKVTCSSSS SSSAASWAVL KSDAKPEEGE RKQQQQHNSY  120
HHQYSQIDDQ TVDAHTLSST ASMEISQPLD LSGGIDCMDE MGTFGYMDLF ESNEFFDPSS  180
IFQSDSLFME QFQQDQDNQH LAMAHQLQDH HETATTIQSN PQQQKQVVGQ DEENTNKDQS  240
NDNKDPDDMA MVFLEWLRSN RETVSAEDLR SVKIKKSTIE CAARRLGGGK EAMKQLLKLV  300
LEWVQTNHLQ KRRSNSITTK DSNLVAQQQY QDPYQNPNPN SIPRVLESNP SCNFTQTPWM  360
APPPHATAYD PVAGGLLVPI PPPASPPPAA YPSMMGYMTA DPFGNGPSSY QPSPEYHHHM  420
IDSGQPSWPS SPFGMVTAPY GSFPDNNIHL APPQHHPQAF AGYSSQYQPY QYFPGNGERQ  480
LMRLGPSATK EARKKRMARQ RRLVSHHRHH GHQQNSQQLN NQMPDHNHLQ QTRFVGNTTD  540
LNCTGAVPLQ PNPGNWFYWP TATAALSPSA VAMMPSITPE AAPLPPVQQM DRPASNQAQN  600
YNQGRSAAQE RQERQERRQG WKSEKNLKFL LQKVLKQSDV GSLGRIVLPK KEAETHLPEL  660
DARDGISIAM EDIGTSRVWN MRYRYWPNNK SRMYLLENTD DTRSEGTASG AKIREQQKAG  720
KDTKEPACKH SSCQQWIVTF FSHNRTQENN SKVRDKGNER EDQLQHSHLF RFFSSLPCMN  780
RIEMDGEDSL GFVESQLIDD SLQIMAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-122	B3 family protein