PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP010276.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 427aa MW: 48534.8 Da PI: 9.834

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP010276.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47	4.5e-15	132	214	2	90
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +k +++s+v+ +l lpk f++++ +k ++ ++l de+g + ev + +k++ l++GW++F+ ++gL +gD +vF+l++ ++ PCP010276.1 132 VKPMLQSHVTGGFWLGLPKYFCSKNL-PK-RDDIVILIDEDGDECEVIYLAEKRG----LSGGWRGFAIDHGLVDGDALVFQLIRPKTL 214 68999***************9994.43.4558***********545554....9********************9985544 PP
2	B3	39.4	1.1e-12	302	393	2	90
EEE-..-HHHHTT-E.........E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 2 fkvltpsdvlksgrl.........vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 +k++++s+v+ +l l +f+++h ++k ++ +tl de+g+++ + rkk+ l++GWk+F+ a++L +gD +vF+l++ ++f PCP010276.1 302 VKTMLQSHVTGGFWLsyhvsfwqqGLQASFCKNH-LPK-GEEIMTLIDEDGNEYPTIYLARKKG----LSGGWKGFAVAHDLVDGDALVFQLIRPTTF 393 5666666666665553333333335777888777.343.3458*************667776....9*********************986666 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MVAPKLSYEE SRQQRMEENK KRMEALNLPM LAQALKKTPN SPKPSPMKRA KARTMEKQLV 60 EVRRSSRVAN LPTPVYKEVA VVEREMRTRR YSTNRHRDLS NRVYASNEAR DDATARAEAL 120 ESDLGSDYPT MVKPMLQSHV TGGFWLGLPK YFCSKNLPKR DDIVILIDED GDECEVIYLA 180 EKRGLSGGWR GFAIDHGLVD GDALVFQLIR PKTLKMKRAG KPRTYEVKMV EVRRSTRVAN 240 RPAPDYKEVV AERVMIPRRC YATNRHRDMA NRVYASDEAR AAAMVKADEL ELSLGSDHPT 300 FVKTMLQSHV TGGFWLSYHV SFWQQGLQAS FCKNHLPKGE EIMTLIDEDG NEYPTIYLAR 360 KKGLSGGWKG FAVAHDLVDG DALVFQLIRP TTFKISSHLK CNVLVLPFQV YIIRVERPGQ 420 ASSEEST

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MVAPKLSYEE SRQQRMEENK KRMEALNLPM LAQALKKTPN SPKPSPMKRA KARTMEKQLV  60
EVRRSSRVAN LPTPVYKEVA VVEREMRTRR YSTNRHRDLS NRVYASNEAR DDATARAEAL  120
ESDLGSDYPT MVKPMLQSHV TGGFWLGLPK YFCSKNLPKR DDIVILIDED GDECEVIYLA  180
EKRGLSGGWR GFAIDHGLVD GDALVFQLIR PKTLKMKRAG KPRTYEVKMV EVRRSTRVAN  240
RPAPDYKEVV AERVMIPRRC YATNRHRDMA NRVYASDEAR AAAMVKADEL ELSLGSDHPT  300
FVKTMLQSHV TGGFWLSYHV SFWQQGLQAS FCKNHLPKGE EIMTLIDEDG NEYPTIYLAR  360
KKGLSGGWKG FAVAHDLVDG DALVFQLIRP TTFKISSHLK CNVLVLPFQV YIIRVERPGQ  420
ASSEEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-61	B3 family protein