PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP009874.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MYB | ||||||||
Protein Properties | Length: 183aa MW: 20935 Da PI: 10.1509 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.4e-18 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++++G g+W++ ++ g+ R++k+c++rw +yl PCP009874.1 11 KGAWSKQEDQKLIDYIQKHGEGCWNSLPKAAGLSRCGKSCRLRWINYL 58 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 69 | 108 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ PCP009874.1 69 EDEEDLIIRLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNTH 108 89***************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MRKPCYEKIN KGAWSKQEDQ KLIDYIQKHG EGCWNSLPKA AGLSRCGKSC RLRWINYLRP 60 DLKRESIRED EEDLIIRLHA LLGNRWSLIA GRLPGRTDNE VKNYWNTHIR KKLLKMGRTL 120 DPKKPHHHND PHLRRGTTAS VPLLQPDTST PISFALPSDS MSTGAEIHSN KSGLPDLNLD 180 LSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 9e-65 | MYB family protein |