PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009849.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 499aa MW: 55704.9 Da PI: 7.1443

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009849.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56	7.3e-18	196	293	1	96
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+l++sdv+ +gr++lpkk ae++ +++ +e+++lt++d s+r We+k+++ +++s++yv++ + +Fv+ ++L++gD + ++ ++++++l+ PCP009849.1 196 FKKELKNSDVGPLGRIILPKKEAENNlpMLSDREGIQLTVRDvHSNRHWEFKYKFwsNNRSRMYVFE-YTGSFVRKKRLQAGDCIYLY--EDECKNLY 290 89*******************9998888999*****5566***99777777778888.99***************9..66899888 PP EEE CS B3 94 vkv 96 ++v PCP009849.1 291 ISV 293 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MENFNPPSMP STTTVTSTHK TNNSQSTCEP VSCLPSTTCS PLATQYRYYP AQYLAPNPGL 60 QFPHANNHYL YHQAGLHMYP FLVGAQPNMV LSREQASRDQ SGWILDALMS KSARKERKMA 120 RQRSLSLSRN AANAAVSCTC SPPLSRHPPF HGNDGDDDTR GILSTSSSGN GADLQDTKEQ 180 LYLFCTPDNK KLRPLFKKEL KNSDVGPLGR IILPKKEAEN NLPMLSDREG IQLTVRDVHS 240 NRHWEFKYKF WSNNRSRMYV FEYTGSFVRK KRLQAGDCIY LYEDECKNLY ISVEKVPRPV 300 HVAEPSSSQQ RNTTTNPTDQ TIKIVPNINS SLKTNTTDNN KTNTNNSANT NTNTNTNANT 360 PNADAKTLRS NPYVASNLSS PSPYTYVAGD EVDKLSLEQL VEQLKQDQEA NIFADALSMV 420 SRDYREHEEA TTLSNIAASH IETSTQPPST LAAGIDPSSS LSSSETRATM GMVDEDHFEL 480 DDCYKGLGTL PEVNRYKYI

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MENFNPPSMP STTTVTSTHK TNNSQSTCEP VSCLPSTTCS PLATQYRYYP AQYLAPNPGL  60
QFPHANNHYL YHQAGLHMYP FLVGAQPNMV LSREQASRDQ SGWILDALMS KSARKERKMA  120
RQRSLSLSRN AANAAVSCTC SPPLSRHPPF HGNDGDDDTR GILSTSSSGN GADLQDTKEQ  180
LYLFCTPDNK KLRPLFKKEL KNSDVGPLGR IILPKKEAEN NLPMLSDREG IQLTVRDVHS  240
NRHWEFKYKF WSNNRSRMYV FEYTGSFVRK KRLQAGDCIY LYEDECKNLY ISVEKVPRPV  300
HVAEPSSSQQ RNTTTNPTDQ TIKIVPNINS SLKTNTTDNN KTNTNNSANT NTNTNTNANT  360
PNADAKTLRS NPYVASNLSS PSPYTYVAGD EVDKLSLEQL VEQLKQDQEA NIFADALSMV  420
SRDYREHEEA TTLSNIAASH IETSTQPPST LAAGIDPSSS LSSSETRATM GMVDEDHFEL  480
DDCYKGLGTL PEVNRYKYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	2e-42	B3 family protein