PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009816.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WOX

Protein Properties

Length: 426aa MW: 47276.7 Da PI: 8.6068

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009816.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.5	2e-17	58	118	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ +l ++ +++V++WFqNr+ + k+ PCP009816.1 58 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRVQLqeygQVGDANVFYWFQNRKSRSKH 118 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.7	7.8e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k PCP009816.1 57 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHK 119 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSSYSSVGGC EERSPEPKPR 60 WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RVQLQEYGQV GDANVFYWFQ NRKSRSKHKL 120 RNLHNSSRQQ QTHHHHTQLP ISTPVSAATT LNIINAAAPS SSSSSSSEKS SPKAPNKAFS 180 MGFSTHEASV NSPTASVNQS TNFFQPHHPL HNEVLLESPF FFPMHQANIN PNLTQGFCFS 240 ELANVVNVPR HEQTNNNNNN IGPCTNILLS EIMNHGAISR KEYHHHQEDQ IKAMKNVDHQ 300 QHLNYNIDTT TTPTTAAAST TPTVAVPSPV IHNSRGGVGE AGAMAPGGVA KSTVFINDVA 360 FEVGVGPFNV REAFGDDAVL IHSSGQPVLT NEWGLTLHSL HHGGFYYLLM IINVFFWDCR 420 YRRGGS

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSSYSSVGGC EERSPEPKPR  60
WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RVQLQEYGQV GDANVFYWFQ NRKSRSKHKL  120
RNLHNSSRQQ QTHHHHTQLP ISTPVSAATT LNIINAAAPS SSSSSSSEKS SPKAPNKAFS  180
MGFSTHEASV NSPTASVNQS TNFFQPHHPL HNEVLLESPF FFPMHQANIN PNLTQGFCFS  240
ELANVVNVPR HEQTNNNNNN IGPCTNILLS EIMNHGAISR KEYHHHQEDQ IKAMKNVDHQ  300
QHLNYNIDTT TTPTTAAAST TPTVAVPSPV IHNSRGGVGE AGAMAPGGVA KSTVFINDVA  360
FEVGVGPFNV REAFGDDAVL IHSSGQPVLT NEWGLTLHSL HHGGFYYLLM IINVFFWDCR  420
YRRGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	8e-65	WOX family protein