PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009602.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 362aa    MW: 39240.4 Da    PI: 6.5159
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009602.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.93.1e-22120175156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +qVk+WFqNrR+++k
  PCP009602.1 120 KKKYHRHTPNQIQELENFFKECPHPDEKQRSELSRRLGLESKQVKFWFQNRRTQMK 175
                  79999************************************************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MSLGGLISSS GGGNSGGGRG RVVAEIAPHA PSFMPSGTIA HPHFLPSAIP NPMQTSSSAL  60
SLSIQKMDGH SELGFAENFD PGIIGRLRDD EHESKSGSDN FEGASGDDQE GGGGDQPPRK  120
KKYHRHTPNQ IQELENFFKE CPHPDEKQRS ELSRRLGLES KQVKFWFQNR RTQMKTQLER  180
HENIILRQEN DKLIAENGVM KDAISNPVCN NCGGPAIPGQ ISFDEHQLRI ENARLKEELN  240
RICAMANKLP ISSLGIPGSI LNATSGLELG VGRNGMDGMN AVSAGLPMGF DLGDGISSSS  300
PMIPPVKTSS GMMGNEVPFE RSMYIDLALA AMDELVKMVQ VDSLLKINVK VRQGKLVNVR  360
YD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.27e-86HD-ZIP family protein