PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009267.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 308aa    MW: 34828 Da    PI: 4.7813
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009267.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.19.8e-30122179258
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                  +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh
  PCP009267.1 122 SDVWAWRKYGQKPIKGSPHPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 179
                  79*************************998**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVRGCNTDID EVMEDSQIPY FFAPLSLQED DELFQAYFPQ AFEATTTLDE LEELYKPFYA  60
VNQITSPPTI LASSISVPQE VITEAPKLIK NMKESAPICK RISRKNQNKR VVKEVKAEDL  120
FSDVWAWRKY GQKPIKGSPH PRSYYRCSSS KGCSARKQVE RSCSNPETFI ITYTAEHNHV  180
HPTRRNSLAG STRSKFPSSK NKDKCSSCSN SLATPNLAAS IEDDREFVES ADINIVKEEA  240
KLLEEDEITN ENVVLGTMVS DEIFPSLEDL DRKLEPVMDG WFSDQFLDNF PSPWFNINGH  300
SNTVTGAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.11e-49WRKY family protein