PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP009159.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 1351aa MW: 153450 Da PI: 6.5926

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP009159.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.6	1.7e-07	325	405	8	88
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 k+ GF +++ +s ++++ + t+ C + g+ +e+k+++ k+rr + ++++gC +lk +k+ + w+++ + HnH+ PCP009159.1 325 KRNGFVIVTIRSDMGSKST-KPRVTLGCERGGRFKEKKTRAAKKRRGTGTKKCGCPFTLKGEKSAnGDGWMLKVVCGVHNHA 405 6789999888877764444.7899**********99999*****************9998899**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1351 aa Download sequence
MDSEADHTHC EIDQIEEHCA RQLLCLTEQR TGEEPRYTHI EQNEFLHRRH KTLAEEDIAI 60 CECKYDENDP ESACGERCLN VITNTECTPG HCPCGVYCKN QRFQKCEYAK TKLFKTEGCG 120 WGLLANENIK AGQFIIEYCG EVITWKEAKQ RSHTYEIQGL RDAFIISLNA SESIDATEKG 180 SVARFINHSC QPNCETRKWN VLGEIRVGIF AKQDILAGTE LAYDYNFEWY GGAKVRCLCG 240 ASSCSGFLGA KSRGFQGETS SRCSGVGSEC ATDYTSEFTT NEDDNSARDS GVSSDCVMDF 300 TSEFTTYVIF KTRESLMQWA REAGKRNGFV IVTIRSDMGS KSTKPRVTLG CERGGRFKEK 360 KTRAAKKRRG TGTKKCGCPF TLKGEKSANG DGWMLKVVCG VHNHASTEYP DGRSYAGRLS 420 EQETSLLIDL SKSLVRPKEI LSTLKQRDEL NATTIRTIYN ARQRQRVKEK AGRSQMQQLL 480 CKLNEHDYVE WHRRCPMSDS VQDLFWAHPV SLELLRAFPT ILMIDCTYKT NRYHYPLLEV 540 VGVTSTDITF SVAFVFLDSE KEDNYIWALS KLRGVMVECP MPNVIVTDMD LPLMRAIEVV 600 FPTAKNLLCK WHINKHVLAK CKNLFESKER CDRFIMKWNV LVSSSTENDY LRDLAVLQRE 660 FSMYAEVMEY VTNTWLNPFK DRFVSAWTDM IMHFGNVTSN RAEGVHTKLK RELGMSQGNF 720 EGSFESIHSL IELQHTDIKI SFDKCLTVTQ QSFKSSEFKY LRGVVSMFAL EKVLSQSKLA 780 ISIGAGGLGC GCVIPRTHGL PCAHEIVKYK RECRPIPLES LDPHWTKLDI LPPSSAQESM 840 DVNEFPELEL LQRYFLEANA ENRLMLRKRV RELVAPYTTS LVEPGVKSRL RGQLTEKIDM 900 PTQQDPYAFE LKSASVYSHS PSAMDDQQNF KHEQTERTKE VYRTLSMKGI SYIDAFPIGL 960 RPFIQQVKDV RHDGHCGFRA VADLVGLGEN GYLQVRNDLL TELSSYSAHY GELYGSTDRV 1020 RELAQILSFF DEGRAPFDRW MMMPDMGHLI ASCYKVVLFH LSSTQCLTFL PLRSAPVSLP 1080 RRRQIAIGFM NDCHCVEEDT YLWEDDDDRY SVEKIPLYDS AEDEPLSRLF KAVNSSEFDV 1140 AEMMVNVNVD SEPQSTALVV QSLDSVPMEG VVMEVKTEVS EERKLYSENN QLAISKKNAM 1200 ISRIRSNTAG RNYHIGSGSM SNKRSKQYNG KLKHGAQKQV DAKCVAALLA SKEAQEEILN 1260 YERMKNNAAT HLESLYNEIR PAIEEHERDS QDSVATSVAE KWIEACCLKL KAEFDLYSSI 1320 VKSIACTPRR PFGQAEPSDG NTENEIKYLQ N

Sequence ? help Back to Top

Protein Sequence Length: 1351 aa Download sequence

MDSEADHTHC EIDQIEEHCA RQLLCLTEQR TGEEPRYTHI EQNEFLHRRH KTLAEEDIAI  60
CECKYDENDP ESACGERCLN VITNTECTPG HCPCGVYCKN QRFQKCEYAK TKLFKTEGCG  120
WGLLANENIK AGQFIIEYCG EVITWKEAKQ RSHTYEIQGL RDAFIISLNA SESIDATEKG  180
SVARFINHSC QPNCETRKWN VLGEIRVGIF AKQDILAGTE LAYDYNFEWY GGAKVRCLCG  240
ASSCSGFLGA KSRGFQGETS SRCSGVGSEC ATDYTSEFTT NEDDNSARDS GVSSDCVMDF  300
TSEFTTYVIF KTRESLMQWA REAGKRNGFV IVTIRSDMGS KSTKPRVTLG CERGGRFKEK  360
KTRAAKKRRG TGTKKCGCPF TLKGEKSANG DGWMLKVVCG VHNHASTEYP DGRSYAGRLS  420
EQETSLLIDL SKSLVRPKEI LSTLKQRDEL NATTIRTIYN ARQRQRVKEK AGRSQMQQLL  480
CKLNEHDYVE WHRRCPMSDS VQDLFWAHPV SLELLRAFPT ILMIDCTYKT NRYHYPLLEV  540
VGVTSTDITF SVAFVFLDSE KEDNYIWALS KLRGVMVECP MPNVIVTDMD LPLMRAIEVV  600
FPTAKNLLCK WHINKHVLAK CKNLFESKER CDRFIMKWNV LVSSSTENDY LRDLAVLQRE  660
FSMYAEVMEY VTNTWLNPFK DRFVSAWTDM IMHFGNVTSN RAEGVHTKLK RELGMSQGNF  720
EGSFESIHSL IELQHTDIKI SFDKCLTVTQ QSFKSSEFKY LRGVVSMFAL EKVLSQSKLA  780
ISIGAGGLGC GCVIPRTHGL PCAHEIVKYK RECRPIPLES LDPHWTKLDI LPPSSAQESM  840
DVNEFPELEL LQRYFLEANA ENRLMLRKRV RELVAPYTTS LVEPGVKSRL RGQLTEKIDM  900
PTQQDPYAFE LKSASVYSHS PSAMDDQQNF KHEQTERTKE VYRTLSMKGI SYIDAFPIGL  960
RPFIQQVKDV RHDGHCGFRA VADLVGLGEN GYLQVRNDLL TELSSYSAHY GELYGSTDRV  1020
RELAQILSFF DEGRAPFDRW MMMPDMGHLI ASCYKVVLFH LSSTQCLTFL PLRSAPVSLP  1080
RRRQIAIGFM NDCHCVEEDT YLWEDDDDRY SVEKIPLYDS AEDEPLSRLF KAVNSSEFDV  1140
AEMMVNVNVD SEPQSTALVV QSLDSVPMEG VVMEVKTEVS EERKLYSENN QLAISKKNAM  1200
ISRIRSNTAG RNYHIGSGSM SNKRSKQYNG KLKHGAQKQV DAKCVAALLA SKEAQEEILN  1260
YERMKNNAAT HLESLYNEIR PAIEEHERDS QDSVATSVAE KWIEACCLKL KAEFDLYSSI  1320
VKSIACTPRR PFGQAEPSDG NTENEIKYLQ N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-15	FAR1 family protein