PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP009030.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 287aa    MW: 32438.3 Da    PI: 6.1442
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP009030.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.82.7e-16185273191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  ++Y +YA++ GF+v +++ kk k  g +t+ t + s +g+r++++   e +   ++++r++C+a+l+  ++k+ k+++ +++++HnH+l+p
  PCP009030.1 185 DYYYSYARDKGFDVMTHHWKK-KIAGIVTRVTHTFSGQGFRRNDEPV-EGTTYAQPVSRVSCQAHLTCLLKKNRKFKIVSFDTDHNHALVP 273
                  59***********98876555.69999***************99887.99999***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MMTIHPGTYP EDPFFVVFDG LEDKEPTRLD SESSPSDEDD LQGAISSPTC QSQSHDGSLG  60
PPHLNKNKEI MGDLELGLEC SSKESAYDYY YNYARDKGFD VMTHHWKKKI AGIVTRVMED  120
KEPTRLDSES LPSDEDDLQG AIYSPTCQSQ SHDGSLGPPH LNKSKEIMGD LELGMECSSK  180
ESAYDYYYSY ARDKGFDVMT HHWKKKIAGI VTRVTHTFSG QGFRRNDEPV EGTTYAQPVS  240
RVSCQAHLTC LLKKNRKFKI VSFDTDHNHA LVPTPMKHML KINRKMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-05FAR1 family protein