PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008940.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 720aa MW: 83508.1 Da PI: 6.3364

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008940.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.6	1.6e-21	69	160	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g i+kr+fvC+++g++ +kk t +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel PCP008940.1 69 EYYGNFARKNGFSIRKERSRLSPQLG-IYKRDFVCYRSGFAPMKKKPTGEHHRDRKSVRCGCDAKMYLSKEVvdgFSQWFVVQFSNVHNHELL 160 59******************8888.***************************************99866689***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MTSIPSKNIW IRRQQCPCGD WKCYVTYEGD SEEASSIASQ LVKNDSTTSE AMVSPYVGMV 60 FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPM KKKPTGEHHR 120 DRKSVRCGCD AKMYLSKEVV DGFSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE 180 RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLAEKRE 240 NDTLELLEAC KGTKEADEEF VYDFTVDEND KVEHIAWSYG DSVHAYTTFG DAVYFDTSYQ 300 SITYGMLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR FPQTILTDLD 360 PGLRDAIRSE LPGTKHVISL WNILPKVSSW FSVSLGPRYV EFKSEFDVLY RLESTEDFEL 420 QWNQMISMFG LTTDKHIALL YSVRDSWAQS YVRGYFLACM ATTTYSKSVD AFLKGVFSAQ 480 TCLRSFFRAG ILVGNVCLWY MLIVLQLIWF LMLERLQVGI SANFQSQAHR DMQYMHIKTT 540 IPMEEHARSI LTPFAFNALQ QELVLAMQYA VSEMANGSYL VQHFKKIDGE RLVIWIPEEE 600 QIHCSCKEFE SSGLLCRHSL RIYLVKNYFQ LPDKYCLNRW RKEGSLDFYN DHIARTSDDE 660 WIQDYQCLTE TLFTESSITK ERSDYVRREL TTQLTRILNE VRNMPECGGV AMDLTFSPTG

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MTSIPSKNIW IRRQQCPCGD WKCYVTYEGD SEEASSIASQ LVKNDSTTSE AMVSPYVGMV  60
FKSDDDAFEY YGNFARKNGF SIRKERSRLS PQLGIYKRDF VCYRSGFAPM KKKPTGEHHR  120
DRKSVRCGCD AKMYLSKEVV DGFSQWFVVQ FSNVHNHELL EDDQVRLLPA YRKIHEADQE  180
RILLLSKAGF PIHRIVKVLE LEKGIQGGQL PFLERDVRNF VQNRKKVVQE NDALLAEKRE  240
NDTLELLEAC KGTKEADEEF VYDFTVDEND KVEHIAWSYG DSVHAYTTFG DAVYFDTSYQ  300
SITYGMLFGA WLGIDNHGRT IFFGCVLLQD ETPRSFSWAL QTFVRFMRGR FPQTILTDLD  360
PGLRDAIRSE LPGTKHVISL WNILPKVSSW FSVSLGPRYV EFKSEFDVLY RLESTEDFEL  420
QWNQMISMFG LTTDKHIALL YSVRDSWAQS YVRGYFLACM ATTTYSKSVD AFLKGVFSAQ  480
TCLRSFFRAG ILVGNVCLWY MLIVLQLIWF LMLERLQVGI SANFQSQAHR DMQYMHIKTT  540
IPMEEHARSI LTPFAFNALQ QELVLAMQYA VSEMANGSYL VQHFKKIDGE RLVIWIPEEE  600
QIHCSCKEFE SSGLLCRHSL RIYLVKNYFQ LPDKYCLNRW RKEGSLDFYN DHIARTSDDE  660
WIQDYQCLTE TLFTESSITK ERSDYVRREL TTQLTRILNE VRNMPECGGV AMDLTFSPTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein