PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008831.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 281aa    MW: 29505.7 Da    PI: 7.9112
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008831.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001112134123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ykC+ C+k+Fs+   L  H  +H
  PCP008831.1 112 YKCSVCDKVFSSYQALGGHKASH 134
                  9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MALQALNSPT AAGPSPFPFE NEASSLGYAE PWTKRKRSKR PRLDTPHSEE EYLAICLIML  60
ARGNRGGDLA STTATAATDT KETNSAASHQ IITQSPSMEP STSAAPPVKL SYKCSVCDKV  120
FSSYQALGGH KASHRKGSAA GSAIEGPSTS STTTTSAAAA TATASGRSHE CSICHKSFPT  180
GQALGGHKRC HYDGGAAGST ATTTATTSVI TSSEGVGSTS HTVSHGHPRE TFDLNLPALP  240
EFSRDFFVSG EDEVESPHPT KKPRLLLMMK PKIEISQDQQ N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-53C2H2 family protein