PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008752.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

FAR1

Protein Properties

Length: 792aa MW: 90345.4 Da PI: 7.0404

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008752.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.5	7.4e-31	85	179	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s s++s+r+g i++r fvC keg+r +++ k + +++r+raetr+gCka+l++k +++g+w+v+ +++eHnHel+p PCP008752.1 85 FYNSYARRIGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVNKNGKsgsdcEGRAKRPRAETRVGCKAMLVIKVHDSGRWVVSAFVKEHNHELVP 179 9*************************************999888899999999************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MEFEPLSLGN DDVLEFDMMG LGYIDQPVDH DDLLHDSPAT AIPTPTGSDV VSSVAILEHY 60 IPEGDSSLEP CEGMEFESEE AAKAFYNSYA RRIGFSTRVS MSRRSRRDGA IIQRSFVCAK 120 EGFRVNKNGK SGSDCEGRAK RPRAETRVGC KAMLVIKVHD SGRWVVSAFV KEHNHELVPP 180 DKVHSLRSHR HVSGSAKSLI DTLQGAGIGP RGIMSALIKE YGGIRNVGFT ERDCRNYMRS 240 CKQRTLGGDT QLLLDYLKSR QAKDPAFFFA VQGDEDQCMG NFFWVDPKAR NDYTYFGDTV 300 TFDTTYRSNR YRLPFAPFTG VNHHGQPVFF GCALLINESE ASFLWLFKTW LKAMSGQPPL 360 SITTDHDRVI TMAITQVFPE TRHRFCKWHI FKECQEKLSS VLCEHSNFEA ELHKCVNLSE 420 SIEEFESCWL SLTGKYDLGE HKWLQSMYAD RQQWVPVYLR GTFFAEMSVT QCSDSMNSYF 480 DGYVNASTTL QLFVKQYEKA VESRYEKEVR ADYDTINTAP VLKTPSPMEK QAAGLYTRKL 540 FTKFQEELVE TLTFLATKVE DEEAGSIFQV AKFGESHKAY TVRFNVHEMK AFCSCQMYEF 600 SGLLCAHILT VFRVTNVLTL PSHFILKRWT RNAKSGVVLE EHAGDLLNKP QESLPVRYNN 660 LRHEALKYVD EGITTAEIYN VAMDALQVAA NKVATEMQNG RRAATTNTAG REDWFRLGNQ 720 SNNTFGDHKR GFETLSADHQ DKKMQKLERQ LERARRKCES YRANLLSVLK DIEEQKLELC 780 VKVENIKLRM KE

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MEFEPLSLGN DDVLEFDMMG LGYIDQPVDH DDLLHDSPAT AIPTPTGSDV VSSVAILEHY  60
IPEGDSSLEP CEGMEFESEE AAKAFYNSYA RRIGFSTRVS MSRRSRRDGA IIQRSFVCAK  120
EGFRVNKNGK SGSDCEGRAK RPRAETRVGC KAMLVIKVHD SGRWVVSAFV KEHNHELVPP  180
DKVHSLRSHR HVSGSAKSLI DTLQGAGIGP RGIMSALIKE YGGIRNVGFT ERDCRNYMRS  240
CKQRTLGGDT QLLLDYLKSR QAKDPAFFFA VQGDEDQCMG NFFWVDPKAR NDYTYFGDTV  300
TFDTTYRSNR YRLPFAPFTG VNHHGQPVFF GCALLINESE ASFLWLFKTW LKAMSGQPPL  360
SITTDHDRVI TMAITQVFPE TRHRFCKWHI FKECQEKLSS VLCEHSNFEA ELHKCVNLSE  420
SIEEFESCWL SLTGKYDLGE HKWLQSMYAD RQQWVPVYLR GTFFAEMSVT QCSDSMNSYF  480
DGYVNASTTL QLFVKQYEKA VESRYEKEVR ADYDTINTAP VLKTPSPMEK QAAGLYTRKL  540
FTKFQEELVE TLTFLATKVE DEEAGSIFQV AKFGESHKAY TVRFNVHEMK AFCSCQMYEF  600
SGLLCAHILT VFRVTNVLTL PSHFILKRWT RNAKSGVVLE EHAGDLLNKP QESLPVRYNN  660
LRHEALKYVD EGITTAEIYN VAMDALQVAA NKVATEMQNG RRAATTNTAG REDWFRLGNQ  720
SNNTFGDHKR GFETLSADHQ DKKMQKLERQ LERARRKCES YRANLLSVLK DIEEQKLELC  780
VKVENIKLRM KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein