PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008707.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 685aa MW: 75428.4 Da PI: 6.6211

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008707.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	8.6e-32	228	285	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d++++ei+Y+g+H+h+k PCP008707.1 228 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 285 8**************************************.*************85 PP
2	WRKY	105.9	2.1e-33	403	461	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ PCP008707.1 403 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 461 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 685 aa Download sequence
MDSTALDHPS GPSDDVDPGL TDFQPSSEPA FYSSAAASGG AKYKLMSPAK LPISRSPCLT 60 IPPGLSPTSF LESPVLLSNM KAEPSPTTGS FLKPQMLYGS LSSTTYSATT VCSDFNTSDE 120 RNSGSFEFKP HAISNMVTTD YNHYRNEQPV QVPGQAQPQS HASPTLAKNE MAVSSNELSL 180 SAPVHTGGAS APVEDDSGDL TQREHPHPGV QTSQGDNKGN GPSVISSDDG YNWRKYGQKH 240 VKGSEFPRSY YKCTHPNCEV KKLFERSHDG QITEIIYKGT HDHPKPQPSR RYNTGAMMPA 300 QEERSDKASS LAGQDDKPSG IYGQMSSNNE PNSTPELSPV TGNDDSVEGT GALSNRLPDE 360 VDEDDQFSKR RRMDVGSIDI TPIVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN 420 PNPRSYYKCT NAGCPVRKHV ERASHDPKAV ITTYEGKHNH DVPTAKSSSH DTSGPTTVNV 480 LSRIRPEESD TISLDLGVGM TSGGEIRTNE HLQLHSDLVE RQSHTNSNFR VAQNTPVSTY 540 YGVLNGGMNQ YGSRENPSES RSIEIRPLNH SSYPYPQNMG RVLTVDDKVF LNVDARSIMH 600 RKMMESKISC RDALPQLMVR ALYSVRILNE FVKVSGNDRA EATFNAVKQD PNRPEGVELH 660 RNAQKVVTVV QRNDEDIQRE NLRGI

Sequence ? help Back to Top

Protein Sequence Length: 685 aa Download sequence

MDSTALDHPS GPSDDVDPGL TDFQPSSEPA FYSSAAASGG AKYKLMSPAK LPISRSPCLT  60
IPPGLSPTSF LESPVLLSNM KAEPSPTTGS FLKPQMLYGS LSSTTYSATT VCSDFNTSDE  120
RNSGSFEFKP HAISNMVTTD YNHYRNEQPV QVPGQAQPQS HASPTLAKNE MAVSSNELSL  180
SAPVHTGGAS APVEDDSGDL TQREHPHPGV QTSQGDNKGN GPSVISSDDG YNWRKYGQKH  240
VKGSEFPRSY YKCTHPNCEV KKLFERSHDG QITEIIYKGT HDHPKPQPSR RYNTGAMMPA  300
QEERSDKASS LAGQDDKPSG IYGQMSSNNE PNSTPELSPV TGNDDSVEGT GALSNRLPDE  360
VDEDDQFSKR RRMDVGSIDI TPIVKPIREP RVVVQTLSEV DILDDGYRWR KYGQKVVRGN  420
PNPRSYYKCT NAGCPVRKHV ERASHDPKAV ITTYEGKHNH DVPTAKSSSH DTSGPTTVNV  480
LSRIRPEESD TISLDLGVGM TSGGEIRTNE HLQLHSDLVE RQSHTNSNFR VAQNTPVSTY  540
YGVLNGGMNQ YGSRENPSES RSIEIRPLNH SSYPYPQNMG RVLTVDDKVF LNVDARSIMH  600
RKMMESKISC RDALPQLMVR ALYSVRILNE FVKVSGNDRA EATFNAVKQD PNRPEGVELH  660
RNAQKVVTVV QRNDEDIQRE NLRGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	0.0	WRKY family protein