PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP008359.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 416aa MW: 46899.6 Da PI: 10.1943

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP008359.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85.2	5.9e-27	290	342	3	54
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYeg 54 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYe+ PCP008359.1 290 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYED 342 99*********************9988********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEEVEEANKA AVESCHRVLS LLSQPQDQVQ YRNLMVETGK AVSRFKKVIS ILNTGLGHAR 60 VRKLKKLQIP FPERILLDNP NSIGDRPSKT PHFLQSRFPE NPTQDLSLDV KSSLCLGNPS 120 LELSANGKTP IHPAQQVPPA QYHFFQQQQQ QQRQQQQQQH QQQRMLLQQQ QMKPQTEMMY 180 RRSNSGINLN FDSSSYTPTM SSTRSFISSL SIDGSVANFD GNSFHLIGAP ISSDQNSHHK 240 RKCSARGDDG SVKCVGSSGR CHCSKKRKHR VKRSIKVPAI SNKLADIPPD DYSWRKYGQK 300 PIKGSPHPRG YYKCSSMRGC PARKHVERCL EEPSMLIVTY EDGFRKDELE AKSQVVLFTK 360 LLLLSIVVGK KKSKFGVPNE GDQDVLLLFL HSNQTKMIFL GSIPRYGVDS CIQSGI

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEEVEEANKA AVESCHRVLS LLSQPQDQVQ YRNLMVETGK AVSRFKKVIS ILNTGLGHAR  60
VRKLKKLQIP FPERILLDNP NSIGDRPSKT PHFLQSRFPE NPTQDLSLDV KSSLCLGNPS  120
LELSANGKTP IHPAQQVPPA QYHFFQQQQQ QQRQQQQQQH QQQRMLLQQQ QMKPQTEMMY  180
RRSNSGINLN FDSSSYTPTM SSTRSFISSL SIDGSVANFD GNSFHLIGAP ISSDQNSHHK  240
RKCSARGDDG SVKCVGSSGR CHCSKKRKHR VKRSIKVPAI SNKLADIPPD DYSWRKYGQK  300
PIKGSPHPRG YYKCSSMRGC PARKHVERCL EEPSMLIVTY EDGFRKDELE AKSQVVLFTK  360
LLLLSIVVGK KKSKFGVPNE GDQDVLLLFL HSNQTKMIFL GSIPRYGVDS CIQSGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	1e-100	WRKY family protein