PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP008234.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 353aa    MW: 39022.5 Da    PI: 5.6259
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP008234.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.64.6e-27131192159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v++s+ dp++++ tY+g H+++
  PCP008234.1 131 LDDGYSWRKYGQKNILGANHPRGYYRCTYRgtqGCVATKQVQKSDADPTTFVLTYRGVHTCN 192
                  59***************************99889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MEKRKSMERE QESLTSELTQ GKELAEQLMS HLHHSSSEET RDFLISKILF SYEKALSLLT  60
GSGDGSDGES KHITARETML ESPTSFGNSS PLSEISNQDC KHKNVFKKTK TMPSWTEEVK  120
VSSGTGLDGS LDDGYSWRKY GQKNILGANH PRGYYRCTYR GTQGCVATKQ VQKSDADPTT  180
FVLTYRGVHT CNKASQLARV KQGLKGNQNK TLEVKKAKQF SPEMSFSFGR AGLRVKTEHL  240
DAREDDIFSP FSFPSTPIES EKVGDHIFCS TMMENNLVDG YAPIFGSPSA TFESDYLAVS  300
PCHMSSFGLA LDVQTSESGL TEIISAPTSV TNSPIGDFDF SIDDLEFPPE YLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-37WRKY family protein