PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP007954.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 367aa MW: 41363.3 Da PI: 6.5009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP007954.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd lv++++++G+g+W+ ++ g+ R++k+c++rw +yl PCP007954.1 14 KGPWTTEEDAMLVNYIQKHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr + eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ PCP007954.1 67 RGRISFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNHWNTH 111 79999***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MGRAPCCDKN GLKKGPWTTE EDAMLVNYIQ KHGPGNWRNL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRI SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNHWNT HIRKRLLRMG 120 IDPVTHAPRI DFLDLSSILS SYVCNNPAAA LLNLSNLLNS TQQQQPLVNP ELLRLATSLL 180 SIKQENPELC PQNYTLHQNQ ICSSQEQNNQ VLPPLQSNDQ FQNLIQGGDF SADMAKHLMQ 240 QINVEAYSPN MNNLSCPLSQ ENIVPSNLST DHHQTAVSQP NYVPCSTTSS SPNPDFPENS 300 YFQSLNYNKN HNLSFDSVMS TPYSSPTPLN SSGTYINSST EDEKESYCSS WLKFEIPEST 360 VDISDIM

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MGRAPCCDKN GLKKGPWTTE EDAMLVNYIQ KHGPGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRI SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNHWNT HIRKRLLRMG  120
IDPVTHAPRI DFLDLSSILS SYVCNNPAAA LLNLSNLLNS TQQQQPLVNP ELLRLATSLL  180
SIKQENPELC PQNYTLHQNQ ICSSQEQNNQ VLPPLQSNDQ FQNLIQGGDF SADMAKHLMQ  240
QINVEAYSPN MNNLSCPLSQ ENIVPSNLST DHHQTAVSQP NYVPCSTTSS SPNPDFPENS  300
YFQSLNYNKN HNLSFDSVMS TPYSSPTPLN SSGTYINSST EDEKESYCSS WLKFEIPEST  360
VDISDIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	4e-95	MYB family protein